RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 TGOLN2O43493 480 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 ZNF780AO75290 641 aaPredicted RBP2.57□□□□□ -2
HERPUD1-211ENST00000566550 KBTBD11O94819 623 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 NSA2O95478 260 aaKnown RBP2.57□□□□□ -2
HERPUD1-211ENST00000566550 APOEP02649 317 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 CD3GP09693 182 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 ZP3P21754 424 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 ANOS1P23352 680 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 F8A1P23610 371 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 G0S2P27469 103 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 PFN2P35080 140 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 RPA3P35244 121 aaPredicted RBP2.57□□□□□ -2
HERPUD1-211ENST00000566550 CAV2P51636 162 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 NDUFA8P51970 172 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 NKX2-5P52952 324 aaPredicted RBP2.57□□□□□ -2
HERPUD1-211ENST00000566550 DLX1P56177 255 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 TAS2R46P59540 309 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 RPS21P63220 83 aaKnown RBP2.57□□□□□ -2
HERPUD1-211ENST00000566550 RPL18AQ02543 176 aaKnown RBP2.57□□□□□ -2
HERPUD1-211ENST00000566550 CD164Q04900 197 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 FZD2Q14332 565 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 PRPSAP1Q14558 356 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 KIAA0087Q14695 138 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 OR2B11Q5JQS5 317 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 ANKRD22Q5VYY1 191 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 CASP12Q6UXS9 341 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 FAM92BQ6ZTR7 304 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 LINC00173Q6ZV60 143 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 C17orf82Q86X59 251 aaPredicted RBP2.57□□□□□ -2
HERPUD1-211ENST00000566550 OR4K17Q8NGC6 315 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 OR10AD1Q8NGE0 317 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 OR5L1Q8NGL2 311 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 OR5M1Q8NGP8 315 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 OTUB2Q96DC9 234 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 MRAP2Q96G30 205 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 RANBP9Q96S59 729 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 SH3GL3Q99963 347 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 TMEM208Q9BTX3 173 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 SLIRPQ9GZT3 109 aaKnown RBP2.57□□□□□ -2
HERPUD1-211ENST00000566550 DHX35Q9H5Z1 703 aaKnown RBP2.57□□□□□ -2
HERPUD1-211ENST00000566550 METTL17Q9H7H0 456 aaPredicted RBP2.57□□□□□ -2
HERPUD1-211ENST00000566550 METTL8Q9H825 291 aaKnown RBP2.57□□□□□ -2
HERPUD1-211ENST00000566550 HEXA-AS1Q9H8Q6 139 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 TRIM45Q9H8W5 580 aaPredicted RBP2.57□□□□□ -2
HERPUD1-211ENST00000566550 SDF2L1Q9HCN8 221 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 MYOZ1Q9NP98 299 aaPredicted RBP2.57□□□□□ -2
HERPUD1-211ENST00000566550 MRPL40Q9NQ50 206 aaKnown RBP2.57□□□□□ -2
HERPUD1-211ENST00000566550 BABAM2Q9NXR7 383 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 MOKQ9UQ07 419 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 ACOT9Q9Y305 439 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 KCNE3Q9Y6H6 103 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 USH1CQ9Y6N9 552 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 ABCC5O15440 1437 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 TOP2AP11388 1531 aaKnown RBP2.57□□□□□ -2
HERPUD1-211ENST00000566550 ABCC1P33527 1531 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 TULP4Q9NRJ4 1543 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 FAM135AQ9P2D6 1515 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 CROCC2H7BZ55 1655 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 TET3O43151 1660 aa2.57□□□□□ -2
HERPUD1-211ENST00000566550 KDM5AP29375 1690 aaKnown RBP2.57□□□□□ -2
HERPUD1-211ENST00000566550 DENND4AQ7Z401 1863 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 SCN5AQ14524 2016 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 TRAV8-4A0A0B4J246 113 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 IGHV2OR16-5A0A0B4J2B6 119 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 OR2AT4A6NND4 320 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 M0R036 132 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 TNFRSF11BO00300 401 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 SOCS3O14543 225 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 MAGEB4O15481 346 aaPredicted RBP2.56□□□□□ -2
HERPUD1-211ENST00000566550 FGF16O43320 207 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 HCRTR1O43613 425 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 SSNA1O43805 119 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 CTNSO60931 367 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 ZNF189O75820 626 aaPredicted RBP2.56□□□□□ -2
HERPUD1-211ENST00000566550 GLSO94925 669 aaPredicted RBP2.56□□□□□ -2
HERPUD1-211ENST00000566550 SEMA3DO95025 777 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 SNAPINO95295 136 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 IGLV1-44P01699 117 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 IGLV2-11P01706 119 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 CD8AP01732 235 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 P01737 135 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 RLN2P04090 185 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 TYMSP04818 313 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 CALB1P05937 261 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 RPSAP08865 295 aaKnown RBP2.56□□□□□ -2
HERPUD1-211ENST00000566550 CTXN2P0C2S0 81 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 SNHG28P0DPA3 235 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 ERGP11308 486 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 COX7A1P24310 79 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 MYL9P24844 172 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 HSD11B1P28845 292 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 CEACAM6P40199 344 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 TGM4P49221 684 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 NCBP2P52298 156 aaKnown RBP eCLIP2.56□□□□□ -2
HERPUD1-211ENST00000566550 FGF8P55075 233 aaPredicted RBP2.56□□□□□ -2
HERPUD1-211ENST00000566550 TAS2R39P59534 338 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 RPS23P62266 143 aaKnown RBP2.56□□□□□ -2
HERPUD1-211ENST00000566550 CXCL6P80162 114 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 C2orf54Q08AI8 447 aa2.56□□□□□ -2
HERPUD1-211ENST00000566550 MLLT11Q13015 90 aaPredicted RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms