RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 C14orf119Q9NWQ9 140 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 CLN8Q9UBY8 286 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 RHBDD3Q9Y3P4 386 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 PPIAL4CA0A0B4J2A2 164 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 ACOD1A6NK06 481 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 SNTNA6NMZ2 147 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 ZNF850A8MQ14 1090 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 H0YAE9 185 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 H0YHG0 523 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 LGALS8O00214 317 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 ADAM20O43506 726 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 APOL3O95236 402 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 GYPAP02724 150 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 EGR1P18146 543 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 FPR2P25090 351 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 ATP6V1E1P36543 226 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 ACTG1P63261 375 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 CSNK2BP67870 215 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 MZT1Q08AG7 82 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 BTNL3Q6UXE8 466 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 DCDC5Q6ZRR9 648 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 KCTD8Q6ZWB6 473 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 SSX6Q7RTT6 188 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 WDR86Q86TI4 376 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 COMMD2Q86X83 199 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 BCL6BQ8N143 479 aaPredicted RBP11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 SPERTQ8NA61 448 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 SEMA6DQ8NFY4 1073 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 OR8B12Q8NGG6 310 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 LRRC29Q8WV35 223 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 CYGBQ8WWM9 190 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 PIGCQ92535 297 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 RNFT2Q96EX2 444 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 NUDT16L1Q9BRJ7 211 aaKnown RBP11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 ADI1Q9BV57 179 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 SUCNR1Q9BXA5 334 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 RASSF4Q9H2L5 321 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 VCXQ9H320 206 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 FAM206AQ9NX38 181 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 CTSZQ9UBR2 303 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 IKZF2Q9UKS7 526 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 GTF2A1LQ9UNN4 478 aa11.37□□□□□ -0.59
VPS9D1-204ENST00000565023 IGHV2-70DA0A0C4DH43 119 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 A0A1W2PQL4 384 aaPredicted RBP11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 OOEPA6NGQ2 149 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 HAX1O00165 279 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 SRSF10O75494 262 aaKnown RBP11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 WBP4O75554 376 aaKnown RBP11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 CLIC3O95833 236 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 DBTP11182 482 aaKnown RBP11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 CFL1P23528 166 aaKnown RBP11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 RIDAP52758 137 aaKnown RBP11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 ISL1P61371 349 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 ZNF91Q05481 1191 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 IL18R1Q13478 541 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 RIPK1Q13546 671 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 DMRTC1Q5HYR2 192 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 KLF17Q5JT82 389 aaPredicted RBP11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 ZNF684Q5T5D7 378 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 WDR25Q64LD2 544 aaPredicted RBP11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 GCSAMQ8N6F7 178 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 SIGLECL1Q8N7X8 197 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 OR10H4Q8NGA5 316 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 RAB40AQ8WXH6 277 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 LGALS12Q96DT0 336 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 LYZL4Q96KX0 146 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 DUX5Q96PT3 197 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 TBX5Q99593 518 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 RGCCQ9H4X1 137 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 MRPS18AQ9NVS2 196 aaKnown RBP11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 ERVK-18Q9QC07 812 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 ZNF69Q9UC07 566 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 MRM2Q9UI43 246 aaKnown RBP11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 NUP50Q9UKX7 468 aa11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 EXOGQ9Y2C4 368 aaKnown RBP11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 POLR3KQ9Y2Y1 108 aaPredicted RBP11.36□□□□□ -0.59
VPS9D1-204ENST00000565023 A0A0A6YYJ9 748 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 TRAV40A0A0B4J280 105 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 TMEM269A0A1B0GVZ9 245 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 ANXA2P2A6NMY6 339 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 H0YJX3 145 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 TRIM77I1YAP6 450 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 MAGEB4O15481 346 aaPredicted RBP11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 SULT1C4O75897 302 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 FSHBP01225 129 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 IGHV4-38-2P0DP08 117 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 ACKR3P25106 362 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 CAPGP40121 348 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 HILS1P60008 231 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 ACTC1P68032 377 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 ACTA1P68133 377 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 IL5RAQ01344 420 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 ZNF85Q03923 595 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 PAX8Q06710 450 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 PRDX4Q13162 271 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 ZNF829Q3KNS6 432 aaPredicted RBP11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 SETD9Q8NE22 299 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 CSNK2A3Q8NEV1 391 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 OR1M1Q8NGA1 313 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 PPP1R14AQ96A00 147 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms