RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ZANQ9Y493 2812 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 IGHV1OR15-9A0A0B4J2B8 117 aa3□□□□□ -1.93
CHD9-213ENST00000564845 RAMP1O60894 148 aa3□□□□□ -1.93
CHD9-213ENST00000564845 ICOSLGO75144 302 aa3□□□□□ -1.93
CHD9-213ENST00000564845 OR2B3O76000 313 aa3□□□□□ -1.93
CHD9-213ENST00000564845 CNR1P21554 472 aa3□□□□□ -1.93
CHD9-213ENST00000564845 BRS3P32247 399 aa3□□□□□ -1.93
CHD9-213ENST00000564845 CD96P40200 585 aa3□□□□□ -1.93
CHD9-213ENST00000564845 ADH7P40394 386 aa3□□□□□ -1.93
CHD9-213ENST00000564845 NPY4RP50391 375 aa3□□□□□ -1.93
CHD9-213ENST00000564845 WIPI1Q5MNZ9 446 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 OR52E2Q8NGJ4 325 aa3□□□□□ -1.93
CHD9-213ENST00000564845 PSMF1Q92530 271 aa3□□□□□ -1.93
CHD9-213ENST00000564845 DAZAP1Q96EP5 407 aaKnown RBP3□□□□□ -1.93
CHD9-213ENST00000564845 C1GALT1C1Q96EU7 318 aa3□□□□□ -1.93
CHD9-213ENST00000564845 CHODLQ9H9P2 273 aa3□□□□□ -1.93
CHD9-213ENST00000564845 BCL2L10Q9HD36 194 aa3□□□□□ -1.93
CHD9-213ENST00000564845 TRBV23-1A0A0A0MS06 115 aa3□□□□□ -1.93
CHD9-213ENST00000564845 PRRG2O14669 202 aa3□□□□□ -1.93
CHD9-213ENST00000564845 HSD17B6O14756 317 aa3□□□□□ -1.93
CHD9-213ENST00000564845 GPX5O75715 221 aa3□□□□□ -1.93
CHD9-213ENST00000564845 CBR3O75828 277 aa3□□□□□ -1.93
CHD9-213ENST00000564845 CPEP16870 476 aa3□□□□□ -1.93
CHD9-213ENST00000564845 CSF2RBP32927 897 aa3□□□□□ -1.93
CHD9-213ENST00000564845 RPS19P39019 145 aaKnown RBP3□□□□□ -1.93
CHD9-213ENST00000564845 P2RX1P51575 399 aa3□□□□□ -1.93
CHD9-213ENST00000564845 SNU13P55769 128 aaKnown RBP3□□□□□ -1.93
CHD9-213ENST00000564845 OR12D2P58182 307 aa3□□□□□ -1.93
CHD9-213ENST00000564845 NTRK2Q16620 822 aa3□□□□□ -1.93
CHD9-213ENST00000564845 TMUB2Q71RG4 321 aa3□□□□□ -1.93
CHD9-213ENST00000564845 MED25Q71SY5 747 aa3□□□□□ -1.93
CHD9-213ENST00000564845 LILRB2Q8N423 598 aa3□□□□□ -1.93
CHD9-213ENST00000564845 ZNF433Q8N7K0 673 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 OR4K5Q8NGD3 323 aa3□□□□□ -1.93
CHD9-213ENST00000564845 OR4Q3Q8NH05 313 aa3□□□□□ -1.93
CHD9-213ENST00000564845 OR5W2Q8NH69 310 aa3□□□□□ -1.93
CHD9-213ENST00000564845 SCARF2Q96GP6 870 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 OR2A5Q96R48 311 aa3□□□□□ -1.93
CHD9-213ENST00000564845 EXOSC3Q9NQT5 275 aaKnown RBP3□□□□□ -1.93
CHD9-213ENST00000564845 DNAJB11Q9UBS4 358 aa3□□□□□ -1.93
CHD9-213ENST00000564845 RCE1Q9Y256 329 aa3□□□□□ -1.93
CHD9-213ENST00000564845 A0A0A6YYD5 115 aa3□□□□□ -1.93
CHD9-213ENST00000564845 A0A1B0GW15 77 aa3□□□□□ -1.93
CHD9-213ENST00000564845 B4E171 279 aa3□□□□□ -1.93
CHD9-213ENST00000564845 PPP5D1E7EU14 171 aa3□□□□□ -1.93
CHD9-213ENST00000564845 LANCL1O43813 399 aa3□□□□□ -1.93
CHD9-213ENST00000564845 ADORA3P0DMS8 318 aa3□□□□□ -1.93
CHD9-213ENST00000564845 CA6P23280 308 aa3□□□□□ -1.93
CHD9-213ENST00000564845 RAB38P57729 211 aa3□□□□□ -1.93
CHD9-213ENST00000564845 PDLIM3Q53GG5 364 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 CD276Q5ZPR3 534 aa3□□□□□ -1.93
CHD9-213ENST00000564845 ZNF343Q6P1L6 599 aa3□□□□□ -1.93
CHD9-213ENST00000564845 WDR74Q6RFH5 385 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 OR4D9Q8NGE8 314 aa3□□□□□ -1.93
CHD9-213ENST00000564845 OR2V2Q96R30 315 aa3□□□□□ -1.93
CHD9-213ENST00000564845 SGPP1Q9BX95 441 aa3□□□□□ -1.93
CHD9-213ENST00000564845 TINAGL1Q9GZM7 467 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 PRR13Q9NZ81 148 aa3□□□□□ -1.93
CHD9-213ENST00000564845 TEX13DA0A0J9YY54 714 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 C5orf63A6NC05 138 aa3□□□□□ -1.93
CHD9-213ENST00000564845 LINC00587B1AMM8 73 aa3□□□□□ -1.93
CHD9-213ENST00000564845 MKRN2OSH3BPM6 223 aa3□□□□□ -1.93
CHD9-213ENST00000564845 H7BYZ3 331 aa3□□□□□ -1.93
CHD9-213ENST00000564845 TFF1P04155 84 aa3□□□□□ -1.93
CHD9-213ENST00000564845 CDK1P06493 297 aa3□□□□□ -1.93
CHD9-213ENST00000564845 H2BFMP0C1H6 154 aa3□□□□□ -1.93
CHD9-213ENST00000564845 SRFP11831 508 aa3□□□□□ -1.93
CHD9-213ENST00000564845 SNCAP37840 140 aa3□□□□□ -1.93
CHD9-213ENST00000564845 GCGRP47871 477 aa3□□□□□ -1.93
CHD9-213ENST00000564845 BAK1Q16611 211 aa3□□□□□ -1.93
CHD9-213ENST00000564845 PCGF3Q3KNV8 242 aa3□□□□□ -1.93
CHD9-213ENST00000564845 RNLSQ5VYX0 342 aa3□□□□□ -1.93
CHD9-213ENST00000564845 OR10K2Q6IF99 312 aa3□□□□□ -1.93
CHD9-213ENST00000564845 FAM166AQ6J272 317 aa3□□□□□ -1.93
CHD9-213ENST00000564845 CBLL1Q75N03 491 aa3□□□□□ -1.93
CHD9-213ENST00000564845 OR10H4Q8NGA5 316 aa3□□□□□ -1.93
CHD9-213ENST00000564845 ANAPC16Q96DE5 110 aa3□□□□□ -1.93
CHD9-213ENST00000564845 ZNF300Q96RE9 604 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 GPX7Q96SL4 187 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 GPHA2Q96T91 129 aa3□□□□□ -1.93
CHD9-213ENST00000564845 OR51I2Q9H344 312 aa3□□□□□ -1.93
CHD9-213ENST00000564845 RBFOX1Q9NWB1 397 aaKnown RBP3□□□□□ -1.93
CHD9-213ENST00000564845 AMDHD2Q9Y303 409 aa3□□□□□ -1.93
CHD9-213ENST00000564845 RP1P56715 2156 aa3□□□□□ -1.93
CHD9-213ENST00000564845 TOX4O94842 621 aa3□□□□□ -1.93
CHD9-213ENST00000564845 ACTL6AO96019 429 aa3□□□□□ -1.93
CHD9-213ENST00000564845 MBPP02686 304 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 GABRB1P18505 474 aa3□□□□□ -1.93
CHD9-213ENST00000564845 CYB561P49447 251 aa3□□□□□ -1.93
CHD9-213ENST00000564845 NPSR1Q6W5P4 371 aa3□□□□□ -1.93
CHD9-213ENST00000564845 DOK3Q7L591 496 aa3□□□□□ -1.93
CHD9-213ENST00000564845 OR2M7Q8NG81 312 aa3□□□□□ -1.93
CHD9-213ENST00000564845 SECTM1Q8WVN6 248 aa3□□□□□ -1.93
CHD9-213ENST00000564845 GUCD1Q96NT3 240 aa3□□□□□ -1.93
CHD9-213ENST00000564845 C1QTNF6Q9BXI9 259 aa3□□□□□ -1.93
CHD9-213ENST00000564845 RAB22AQ9UL26 194 aa3□□□□□ -1.93
CHD9-213ENST00000564845 SIT1Q9Y3P8 196 aa3□□□□□ -1.93
CHD9-213ENST00000564845 IGKV1D-43A0A0B4J1Z2 117 aa3□□□□□ -1.93
CHD9-213ENST00000564845 C17orf105B2RV13 164 aa3□□□□□ -1.93
CHD9-213ENST00000564845 C5orf67F2Z3F1 127 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms