RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 GMNCA6NCL1 334 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 RAD51CO43502 376 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 CHMP2AO43633 222 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 AIREO43918 545 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 RDH16O75452 317 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 IGKV3-11P04433 115 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 GSTM3P21266 225 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 RPS12P25398 132 aaKnown RBP2.9□□□□□ -1.95
LINC00560-201ENST00000564593 OR1E1P30953 314 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 C1QTNF8P60827 252 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 SLAQ13239 276 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 ITGB3BPQ13352 177 aaPredicted RBP2.9□□□□□ -1.95
LINC00560-201ENST00000564593 ILKQ13418 452 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 RCAN2Q14206 197 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 EBI3Q14213 229 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 ITIH4Q14624 930 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 PON2Q15165 354 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 QPRTQ15274 297 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 ZNF691Q5VV52 312 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 GPR107Q5VW38 600 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 ZNF720Q7Z2F6 126 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 NT5DC3Q86UY8 548 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 METTL13Q8N6R0 699 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 PQLC3Q8N755 202 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 C15orf56Q8N910 161 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 BPIFCQ8NFQ6 507 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 OR10G2Q8NGC3 310 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 OR5K2Q8NHB8 316 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 DYDC1Q8WWB3 177 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 TMEM230Q96A57 120 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 ZNF681Q96N22 645 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 TMEM109Q9BVC6 243 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 ZYG11BQ9C0D3 744 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 TMBIM4Q9HC24 238 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 RPRD1BQ9NQG5 326 aaKnown RBP2.9□□□□□ -1.95
LINC00560-201ENST00000564593 AGPAT4Q9NRZ5 378 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 NKIRAS1Q9NYS0 192 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 CLN8Q9UBY8 286 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 PRO0461Q9UI25 63 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 ZNF222Q9UK12 451 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 DOCK5Q9H7D0 1870 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 CITO14578 2027 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 IGKV2D-24A0A075B6R9 120 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 GSTTP1A0A1W2PQM5 241 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 ZNF233A6NK53 670 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 H7C0C1 242 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 TRAPPC3O43617 180 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 ATP5HO75947 161 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 LSM8O95777 96 aaKnown RBP2.89□□□□□ -1.95
LINC00560-201ENST00000564593 CALB1P05937 261 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 EIF4EP06730 217 aaKnown RBP2.89□□□□□ -1.95
LINC00560-201ENST00000564593 UBTFL6P0CB48 400 aaPredicted RBP2.89□□□□□ -1.95
LINC00560-201ENST00000564593 ALDH3A1P30838 453 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 PHBP35232 272 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 BRCA1P38398 1863 aaKnown RBP2.89□□□□□ -1.95
LINC00560-201ENST00000564593 PFN3P60673 137 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 GTF2BQ00403 316 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 SNRNP35Q16560 246 aaKnown RBP2.89□□□□□ -1.95
LINC00560-201ENST00000564593 HADHQ16836 314 aaKnown RBP2.89□□□□□ -1.95
LINC00560-201ENST00000564593 RALGAPA2Q2PPJ7 1873 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 AADACL4Q5VUY2 407 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 CEMP1Q6PRD7 247 aaPredicted RBP2.89□□□□□ -1.95
LINC00560-201ENST00000564593 SPESP1Q6UW49 350 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 PEX13Q92968 403 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 MAGOHBQ96A72 148 aaKnown RBP2.89□□□□□ -1.95
LINC00560-201ENST00000564593 NTAN1Q96AB6 310 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 GALNT14Q96FL9 552 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 CHMP6Q96FZ7 201 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 SNF8Q96H20 258 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 NDFIP1Q9BT67 221 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 UCK2Q9BZX2 261 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 SYNDIG1Q9H7V2 258 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 DMAC2Q9NW81 257 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 TBC1D24Q9ULP9 559 aa2.89□□□□□ -1.95
LINC00560-201ENST00000564593 PTPRFP10586 1907 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 DICER1Q9UPY3 1922 aaKnown RBP2.88□□□□□ -1.95
LINC00560-201ENST00000564593 A0A0G2JMZ2 1700 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 ADGRA3Q8IWK6 1321 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 IGHV5-10-1A0A0J9YXX1 117 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 CD160O95971 181 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 CD9P21926 228 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 GTF2A1P52655 376 aaPredicted RBP2.88□□□□□ -1.95
LINC00560-201ENST00000564593 UBE2NP61088 152 aaKnown RBP2.88□□□□□ -1.95
LINC00560-201ENST00000564593 CDH17Q12864 832 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 SNCBQ16143 134 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 FAM83EQ2M2I3 478 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 TTMPQ5BVD1 217 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 DUPD1Q68J44 220 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 C12orf54Q6X4T0 127 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 MRPL55Q7Z7F7 128 aaKnown RBP2.88□□□□□ -1.95
LINC00560-201ENST00000564593 FAM71AQ8IYT1 594 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 COMMD1Q8N668 190 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 LRRC29Q8WV35 223 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 APH1BQ8WW43 257 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 MRGPRFQ96AM1 343 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 PDXPQ96GD0 296 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 COL21A1Q96P44 957 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 SELENOSQ9BQE4 189 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 SPNS1Q9H2V7 528 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 SAV1Q9H4B6 383 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms