RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 C12orf54Q6X4T0 127 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 RBMS3Q6XE24 437 aaKnown RBP16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 DOK3Q7L591 496 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 COMMD2Q86X83 199 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 SLC35F2Q8IXU6 374 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 GALNT4Q8N4A0 578 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 FAM81AQ8TBF8 368 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 ASB17Q8WXJ9 295 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 OR5P3Q8WZ94 311 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 RPL3LQ92901 407 aaKnown RBP16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 DUX5Q96PT3 197 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 MS4A7Q9GZW8 240 aaPredicted RBP16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 PBOV1Q9GZY1 135 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 ADGRL4Q9HBW9 690 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 DUX4Q9UBX2 424 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 ZNF391Q9UJN7 358 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 OAZ3Q9UMX2 235 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 TMEM14AQ9Y6G1 99 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 SAC3D1A6NKF1 404 aa16.57■□□□□ 0.24
SHCBP1-203ENST00000564272 MAGEB4O15481 346 aaPredicted RBP16.57■□□□□ 0.24
SHCBP1-203ENST00000564272 NDUFA2O43678 99 aa16.57■□□□□ 0.24
SHCBP1-203ENST00000564272 PLATP00750 562 aa16.57■□□□□ 0.24
SHCBP1-203ENST00000564272 POLR2IP36954 125 aaKnown RBP16.57■□□□□ 0.24
SHCBP1-203ENST00000564272 GMFBP60983 142 aa16.57■□□□□ 0.24
SHCBP1-203ENST00000564272 KCTD8Q6ZWB6 473 aa16.57■□□□□ 0.24
SHCBP1-203ENST00000564272 ASRGL1Q7L266 308 aa16.57■□□□□ 0.24
SHCBP1-203ENST00000564272 ZDHHC23Q8IYP9 409 aa16.57■□□□□ 0.24
SHCBP1-203ENST00000564272 ZNF679Q8IYX0 411 aa16.57■□□□□ 0.24
SHCBP1-203ENST00000564272 FGFRL1Q8N441 504 aa16.57■□□□□ 0.24
SHCBP1-203ENST00000564272 CENPNQ96H22 339 aaPredicted RBP16.57■□□□□ 0.24
SHCBP1-203ENST00000564272 ABCB9Q9NP78 766 aa16.57■□□□□ 0.24
SHCBP1-203ENST00000564272 H2AFY2Q9P0M6 372 aaPredicted RBP16.57■□□□□ 0.24
SHCBP1-203ENST00000564272 A0A0U1RQV5 110 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 ZNF816-ZNF321PA0A0X1KG74 233 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 DNAJC9-AS1A6NH13 148 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 ACOD1A6NK06 481 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 SLC22A31A6NKX4 558 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 DVL1O14640 695 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 TMPRSS2O15393 492 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 ZNF254O75437 659 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 SFTPBP07988 381 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 RIDAP52758 137 aaKnown RBP16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 CXCR4P61073 352 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 MICBQ29980 383 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 ZNF829Q3KNS6 432 aaPredicted RBP16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 WDR38Q5JTN6 314 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 CD276Q5ZPR3 534 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 ZNF322Q6U7Q0 402 aaPredicted RBP16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 PLEKHG7Q6ZR37 379 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 GID4Q8IVV7 300 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 OR51E1Q8TCB6 317 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 PYDC1Q8WXC3 89 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 ST8SIA4Q92187 359 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 GCDHQ92947 438 aaPredicted RBP16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 PPP1R14AQ96A00 147 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 RNF170Q96K19 258 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 FAM71F1Q96KD3 344 aaPredicted RBP16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 C1orf147Q96MC9 270 aaPredicted RBP16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 CCL13Q99616 98 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 APOL4Q9BPW4 351 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 RIBC2Q9H4K1 309 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 GPR84Q9NQS5 396 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 ENOPH1Q9UHY7 261 aa16.56■□□□□ 0.24
SHCBP1-203ENST00000564272 MDFIC2A0A1B0GVS7 189 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 TMEM89A2RUT3 159 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 TMEM210A6NLX4 147 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 SRRM5B3KS81 715 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 MUC1P15941 1255 aaPredicted RBP16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 DCTDP32321 178 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 CFHR2P36980 270 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 DMRTC1Q5HYR2 192 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 CEP78Q5JTW2 689 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 BRD3OSQ6XYD6 125 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 C9orf139Q6ZV77 190 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 FAM216BQ8N7L0 139 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 SCCPDHQ8NBX0 429 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 OR51G2Q8NGK0 314 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 PCGF1Q9BSM1 259 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 GABARAPL3Q9BY60 117 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 WDR13Q9H1Z4 485 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 KAAG1Q9UBP8 84 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 NUFIP1Q9UHK0 495 aaKnown RBP16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 GTF2A1LQ9UNN4 478 aa16.55■□□□□ 0.24
SHCBP1-203ENST00000564272 ZNF879B4DU55 563 aa16.54■□□□□ 0.24
SHCBP1-203ENST00000564272 ZNF670-ZNF695F2Z2N8 137 aa16.54■□□□□ 0.24
SHCBP1-203ENST00000564272 SRSF10O75494 262 aaKnown RBP16.54■□□□□ 0.24
SHCBP1-203ENST00000564272 IGLV3-1P01715 115 aa16.54■□□□□ 0.24
SHCBP1-203ENST00000564272 TTRP02766 147 aa16.54■□□□□ 0.24
SHCBP1-203ENST00000564272 FAHP16930 419 aa16.54■□□□□ 0.24
SHCBP1-203ENST00000564272 MAP2K3P46734 347 aa16.54■□□□□ 0.24
SHCBP1-203ENST00000564272 GPM6AP51674 278 aa16.54■□□□□ 0.24
SHCBP1-203ENST00000564272 BAMBIQ13145 260 aa16.54■□□□□ 0.24
SHCBP1-203ENST00000564272 BTN2A1Q7KYR7 527 aa16.54■□□□□ 0.24
SHCBP1-203ENST00000564272 TBX5Q99593 518 aa16.54■□□□□ 0.24
SHCBP1-203ENST00000564272 SNTG1Q9NSN8 517 aa16.54■□□□□ 0.24
SHCBP1-203ENST00000564272 CLN6Q9NWW5 311 aa16.54■□□□□ 0.24
SHCBP1-203ENST00000564272 TENM1Q9UKZ4 2725 aa16.54■□□□□ 0.24
SHCBP1-203ENST00000564272 AKR7A2O43488 359 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 APOL3O95236 402 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 TFF1P04155 84 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms