RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 HOXD3P31249 432 aaPredicted RBP9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 GNALP38405 381 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 KIR2DS4P43632 304 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 TGM4P49221 684 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 GSK3AP49840 483 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 KRTAP10-11P60412 298 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 PPP1R8Q12972 351 aaKnown RBP9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 EIF2B1Q14232 305 aaKnown RBP9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 MAPRE2Q15555 327 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 COQ5Q5HYK3 327 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 METTL21CQ5VZV1 264 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 DRAM2Q6UX65 266 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 PLPP7Q8NBV4 271 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 OR9Q2Q8NGE9 314 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 OR8D4Q8NGM9 314 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 OR6K6Q8NGW6 343 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 PIFOQ8TCI5 191 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 NPRL2Q8WTW4 380 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 PPP1R14AQ96A00 147 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 C7orf34Q96L11 122 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 ZNF488Q96MN9 340 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 KCNJ15Q99712 375 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 ANKRD19PQ9H560 264 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 METTL8Q9H825 291 aaKnown RBP9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 YY1AP1Q9H869 796 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 SP140LQ9H930 580 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 SERTAD4Q9NUC0 356 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 KCNG2Q9UJ96 466 aa9.47□□□□□ -0.89
NSMCE1-202ENST00000561960 IGKV1D-17A0A075B6S4 117 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 hCG_38984A0A1B0GV85 526 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 DHRS12A0PJE2 317 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 GADD45GO95257 159 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 NPPAP01160 153 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 PIPP12273 146 aaPredicted RBP9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 COX4I1P13073 169 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 RHCEP18577 417 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 CD33P20138 364 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 ACKR3P25106 362 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 HSD11B1P28845 292 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 OTX1P32242 354 aaPredicted RBP9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 GRK5P34947 590 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 NUDT2P50583 147 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 GPM6AP51674 278 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 ZNF121P58317 390 aaPredicted RBP9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 MXRA7P84157 204 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 PRDX4Q13162 271 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 KRT72Q14CN4 511 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 PGBD2Q6P3X8 592 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 SPERTQ8NA61 448 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 SLC37A3Q8NCC5 494 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 OR4S1Q8NGB4 309 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 STON2Q8WXE9 905 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 PIGCQ92535 297 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 OTULINQ96BN8 352 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 RAB3IPQ96QF0 476 aaPredicted RBP9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 CDCA4Q9BXL8 241 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 RNPEPL1Q9HAU8 725 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 DNAH7Q8WXX0 4024 aa9.46□□□□□ -0.9
NSMCE1-202ENST00000561960 TRBV23-1A0A0A0MS06 115 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 OR2AT4A6NND4 320 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 XRCC2O43543 280 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 XPNPEP2O43895 674 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 PEX14O75381 377 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 SOX14O95416 240 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 RRM2P31350 389 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 NAA10P41227 235 aaPredicted RBP9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 ENTPD1P49961 510 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 MZT1Q08AG7 82 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 CRMP1Q14194 572 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 CEP78Q5JTW2 689 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 NCR3LG1Q68D85 454 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 GLYATQ6IB77 296 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 ZNF788Q6ZQV5 615 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 ANGPTL6Q8NI99 470 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 C8orf46Q8TAG6 207 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 HPSE2Q8WWQ2 592 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 PGAM5Q96HS1 289 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 NPFFR1Q9GZQ6 430 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 KRCC1Q9NPI7 259 aaPredicted RBP9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 NLKQ9UBE8 527 aa9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 SF3B6Q9Y3B4 125 aaKnown RBP9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 DYNC2H1Q8NCM8 4307 aaKnown RBP9.45□□□□□ -0.9
NSMCE1-202ENST00000561960 SH2D7A6NKC9 451 aaPredicted RBP9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 FAM183AA6NL82 134 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 ZNF878C9JN71 531 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 M0R1W7 72 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 ARPC3O15145 178 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 SIGLEC5O15389 551 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 ACAA1P09110 424 aaPredicted RBP9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 GLRA1P23415 457 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 BLCAPP62952 87 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 ACSM1Q08AH1 577 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 BLMHQ13867 455 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 LDLRAD2Q5SZI1 272 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 C10orf99Q6UWK7 81 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 CCDC121Q6ZUS5 278 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 ERI1Q8IV48 349 aaKnown RBP9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 OR6N2Q8NGY6 317 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 SPSB4Q96A44 273 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 RNF170Q96K19 258 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms