RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 ACOT12Q8WYK0 555 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 UFD1Q92890 307 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 HIST1H2ACQ93077 130 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 BPIFA2Q96DR5 249 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 SENP5Q96HI0 755 aaPredicted RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 CEP19Q96LK0 163 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 KCTD7Q96MP8 289 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 VSTM2LQ96N03 204 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 ZNF582Q96NG8 517 aaPredicted RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 ZFP3Q96NJ6 502 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 RASL10BQ96S79 203 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 CCDC32Q9BV29 185 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 TAPBPLQ9BX59 468 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 BPESC1Q9GZL8 116 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 SLIRPQ9GZT3 109 aaKnown RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 NXF2Q9GZY0 626 aaKnown RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 UBQLN3Q9H347 655 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 SP140LQ9H930 580 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 AMBNQ9NP70 447 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 SDHAF3Q9NRP4 125 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 CBLN4Q9NTU7 201 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 NDUFB11Q9NX14 153 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 BABAM2Q9NXR7 383 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 QPCTLQ9NXS2 382 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 RABL2AQ9UBK7 228 aaPredicted RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 SLC7A7Q9UM01 511 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 BOKQ9UMX3 212 aaPredicted RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 STUB1Q9UNE7 303 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 RABL2BQ9UNT1 228 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 EXOGQ9Y2C4 368 aaKnown RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 CAB39Q9Y376 341 aaPredicted RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 U3KQK5 164 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 MED12LQ86YW9 2145 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 KIAA1109Q2LD37 5005 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 EXPH5Q8NEV8 1989 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 A0A087WUJ7 227 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 A0A0B4J2E0 115 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 LOC100506127A0A0U1RQW1 187 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 IQCMA0A1B0GVH7 501 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 A0A1B0GWA3 101 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 A0A1B0GX12 115 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 TRDV1A0A1B0GX56 115 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 LOC390937A0A1W2PQ73 354 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 A0A1W2PQD3 144 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 DPRXA6NFQ7 191 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 PRSS47A8MTI9 375 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 CENPBD1B2RD01 187 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 C17orf105B2RV13 164 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 C4orf51C9J302 202 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 PRR23D1E9PI22 279 aaPredicted RBP2.71□□□□□ -1.98
SPG11-225ENST00000561391 ZNF670-ZNF695F2Z2N8 137 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 NPIPB9F8W1W9 429 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 K7EIL1 84 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 NDUFS8O00217 210 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 TO15178 435 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 OR2T1O43869 369 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 PRKYO43930 277 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 PRKRAO75569 313 aaKnown RBP2.71□□□□□ -1.98
SPG11-225ENST00000561391 SULT1C4O75897 302 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 ARL6IP5O75915 188 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 NDUFB2O95178 105 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 SOX14O95416 240 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 MT-ATP6P00846 226 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 PTHP01270 115 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 TACSTD2P09758 323 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 OR2T7P0C7T2 308 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 OCM2P0CE71 109 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 OCMP0CE72 109 aaPredicted RBP2.71□□□□□ -1.98
SPG11-225ENST00000561391 PRR23D2P0DMB1 279 aaPredicted RBP2.71□□□□□ -1.98
SPG11-225ENST00000561391 CT45A8P0DMV1 189 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 CT45A9P0DMV2 189 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 IFI30P13284 250 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 SELEP16581 610 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 GADD45AP24522 165 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 BDKRB2P30411 391 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 TGFBR2P37173 567 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 ETV6P41212 452 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 SLC1A3P43003 542 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 STARP49675 285 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 FABP6P51161 128 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 PSMD7P51665 324 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 PNLIPRP2P54317 469 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 CDH11P55287 796 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 VBP1P61758 197 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 NCS1P62166 190 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 ACTA2P62736 377 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 ACTG2P63267 376 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 BSPH1Q075Z2 132 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 FUT5Q11128 374 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 LTB4RQ15722 352 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 CDONQ4KMG0 1287 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 CCDC58Q4VC31 144 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 CT45A2Q5DJT8 189 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 SLC35D3Q5M8T2 416 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 DDI2Q5TDH0 399 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 AADACL4Q5VUY2 407 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 GPR139Q6DWJ6 353 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 ZFAND6Q6FIF0 208 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 ACSM5Q6NUN0 579 aa2.71□□□□□ -1.98
SPG11-225ENST00000561391 ZNF544Q6NX49 715 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms