RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ADI1Q9BV57 179 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 RNPEPL1Q9HAU8 725 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 HIF1ANQ9NWT6 349 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 RNF7Q9UBF6 113 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 PIGLQ9Y2B2 252 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 MXRA5Q9NR99 2828 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 PPIAL4EA0A075B759 164 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 IGHV3OR15-7A0A075B7D8 119 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 A6NLC8 198 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 PPIAL4DF5H284 164 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 TRAPPC2LH3BP13 241 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 J3QLW9 94 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 MPZL2O60487 215 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 DHRS3O75911 302 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 TFF1P04155 84 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 WNT2P09544 360 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 LIMS3P0CW19 117 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 LIMS4P0CW20 117 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 PPIAL4FP0DN26 164 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 ZNF19P17023 458 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 CCL1P22362 96 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 CAPGP40121 348 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 MDH2P40926 338 aaKnown RBP11.62□□□□□ -0.55
TPM1-230ENST00000561266 DVL1P1P54792 670 aaPredicted RBP11.62□□□□□ -0.55
TPM1-230ENST00000561266 LCN2P80188 198 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 DOC2BQ14184 412 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 GALEQ14376 348 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 ZNF404Q494X3 552 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 TMEM42Q69YG0 159 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 WDR82Q6UXN9 313 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 MOB3CQ70IA8 216 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 PEG10Q86TG7 708 aaKnown RBP11.62□□□□□ -0.55
TPM1-230ENST00000561266 COMMD2Q86X83 199 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 SPERTQ8NA61 448 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 SEMA6DQ8NFY4 1073 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 OR2G2Q8NGZ5 317 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 OR10AC1Q8NH08 325 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 ERGIC1Q969X5 290 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 TMEM186Q96B77 213 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 RNF170Q96K19 258 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 C4orf36Q96KX1 117 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 ALG8Q9BVK2 526 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 TLNRD1Q9H1K6 362 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 FN3KRPQ9HA64 309 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 MMP26Q9NRE1 261 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 TMEM160Q9NX00 188 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 ERVK13-1Q9NX77 482 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 FRRS1LQ9P0K9 344 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 ZNF391Q9UJN7 358 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 KCNS2Q9ULS6 477 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 PPIAL4AQ9Y536 164 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 MPC1Q9Y5U8 109 aa11.62□□□□□ -0.55
TPM1-230ENST00000561266 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.61□□□□□ -0.55
TPM1-230ENST00000561266 ZNF816-ZNF321PA0A0X1KG74 233 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 A0A1B0GW55 424 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 IFNL4K9M1U5 179 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 CDIPTO14735 213 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 PHF1O43189 567 aaPredicted RBP11.61□□□□□ -0.55
TPM1-230ENST00000561266 RHBDL1O75783 438 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 DUX4L2P0CJ85 424 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 DUX4L3P0CJ86 424 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 DUX4L4P0CJ87 422 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 DUX4L5P0CJ88 424 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 DUX4L6P0CJ89 424 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 DUX4L7P0CJ90 424 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 GNALP38405 381 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 ETV1P50549 477 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 GPM6AP51674 278 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 AQP4P55087 323 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 ACTC1P68032 377 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 ACTA1P68133 377 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 RIPPLY1Q0D2K3 151 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 FAM76BQ5HYJ3 339 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 TTC23Q5W5X9 447 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 FDX2Q6P4F2 183 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 DUX4L9Q6RFH8 374 aaPredicted RBP11.61□□□□□ -0.55
TPM1-230ENST00000561266 ZNF841Q6ZN19 808 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 ZDHHC23Q8IYP9 409 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 FGFRL1Q8N441 504 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 SCCPDHQ8NBX0 429 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 OR11L1Q8NGX0 322 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 FBLIM1Q8WUP2 373 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 LRRC29Q8WV35 223 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 Q96MT0 163 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 MOB1AQ9H8S9 216 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 FGF20Q9NP95 211 aaPredicted RBP11.61□□□□□ -0.55
TPM1-230ENST00000561266 C8orf4Q9NR00 106 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 GPR173Q9NS66 373 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 C14orf119Q9NWQ9 140 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 CTSZQ9UBR2 303 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 DUX4Q9UBX2 424 aa11.61□□□□□ -0.55
TPM1-230ENST00000561266 NOP16Q9Y3C1 178 aaKnown RBP11.61□□□□□ -0.55
TPM1-230ENST00000561266 RPL36Q9Y3U8 105 aaKnown RBP11.61□□□□□ -0.55
TPM1-230ENST00000561266 AMY2BP19961 511 aa11.6□□□□□ -0.55
TPM1-230ENST00000561266 GTF2A1P52655 376 aaPredicted RBP11.6□□□□□ -0.55
TPM1-230ENST00000561266 RAB40BQ12829 278 aa11.6□□□□□ -0.55
TPM1-230ENST00000561266 XAF1Q6GPH4 301 aa11.6□□□□□ -0.55
TPM1-230ENST00000561266 FAM90A1Q86YD7 464 aa11.6□□□□□ -0.55
TPM1-230ENST00000561266 OR51A4Q8NGJ6 313 aa11.6□□□□□ -0.55
TPM1-230ENST00000561266 OR51F2Q8NH61 342 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms