RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 RSU1Q15404 277 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 SURF2Q15527 256 aaPredicted RBP14.59□□□□□ -0.07
TPM1-228ENST00000560975 C1QL4Q86Z23 238 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 SUMF2Q8NBJ7 301 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 OR5D18Q8NGL1 313 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 FAM213BQ8TBF2 198 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 GPR119Q8TDV5 335 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 OR8D2Q9GZM6 311 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 PARPBPQ9NWS1 579 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 LINC01553A4QN01 128 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 A8MVM7 634 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 CDC14BO60729 498 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 GSTP1P09211 210 aaKnown RBP14.58□□□□□ -0.08
TPM1-228ENST00000560975 CRABP1P29762 137 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 RBP2P50120 134 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 ZNF124Q15973 351 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 GGNBP1Q5YKI7 109 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 LHFPL1Q86WI0 220 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 TMEM156Q8N614 296 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 GPER1Q99527 375 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 IER2Q9BTL4 223 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 PBOV1Q9GZY1 135 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 C1orf123Q9NWV4 160 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 ZDHHC8Q9ULC8 765 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 C14orf166Q9Y224 244 aaKnown RBP14.58□□□□□ -0.08
TPM1-228ENST00000560975 RFNGQ9Y644 331 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 CEACAM18A8MTB9 384 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 DIRAS3O95661 229 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 CLPSP04118 112 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 CTNNB1P35222 781 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 FOXK1P85037 733 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 ZNF776Q68DI1 518 aaPredicted RBP14.58□□□□□ -0.08
TPM1-228ENST00000560975 TMEM182Q6ZP80 229 aaPredicted RBP14.58□□□□□ -0.08
TPM1-228ENST00000560975 APCDD1LQ8NCL9 501 aa14.58□□□□□ -0.08
TPM1-228ENST00000560975 A6NCN8 305 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 H0YIG0 161 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 HCKP08631 526 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 CXCL1P09341 107 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 GLI4P10075 376 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 RAB1AP62820 205 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 ACY1Q03154 408 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 KLHL24Q6TFL4 600 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 PLXDC2Q6UX71 529 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 PRODH2Q9UF12 536 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 SRPK3Q9UPE1 567 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 SEC16AO15027 2179 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 IL33O95760 270 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 GP1BBP13224 206 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 ZNF542PQ5EBM4 170 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 TMEM31Q5JXX7 168 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 OOSP2Q86WS3 158 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 COMMD1Q8N668 190 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 ZNF610Q8N9Z0 462 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 NTNG2Q96CW9 530 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 MUCL1Q96DR8 90 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 MMABQ96EY8 250 aaPredicted RBP14.57□□□□□ -0.08
TPM1-228ENST00000560975 WDR92Q96MX6 357 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 PBDC1Q9BVG4 233 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.57□□□□□ -0.08
TPM1-228ENST00000560975 ZNF701Q9NV72 531 aaPredicted RBP14.57□□□□□ -0.08
TPM1-228ENST00000560975 FAM206AQ9NX38 181 aa14.57□□□□□ -0.08
TPM1-228ENST00000560975 F5P12259 2224 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 TMED7-TICAM2A0A0A6YYA0 188 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 FIGNL2A6NMB9 653 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 ZNF878C9JN71 531 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 PLPP3O14495 311 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 PLRG1O43660 514 aaKnown RBP14.56□□□□□ -0.08
TPM1-228ENST00000560975 KLK2P20151 261 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 SP6Q3SY56 376 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 CHRFAM7AQ494W8 412 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 CDCP2Q5VXM1 449 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 NPRL2Q8WTW4 380 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 TOX2Q96NM4 488 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 YPEL4Q96NS1 127 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 MED29Q9NX70 200 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 PPP4R1LQ9P1A2 415 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 SZT2Q5T011 3432 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 BORCS7-ASMTA0A0B4J1R7 106 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 ZNF726A6NNF4 738 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 ZNF205O95201 554 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 IFNA21P01568 189 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 SOD3P08294 240 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 HIST1H1BP16401 226 aaKnown RBP14.56□□□□□ -0.08
TPM1-228ENST00000560975 TAGLN2P37802 199 aaKnown RBP14.56□□□□□ -0.08
TPM1-228ENST00000560975 NFATC4Q14934 902 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 OR51T1Q8NGJ9 327 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 Q8WTZ3 238 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 EMG1Q92979 244 aaKnown RBP14.56□□□□□ -0.08
TPM1-228ENST00000560975 SLAMF6Q96DU3 332 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 FAM71F1Q96KD3 344 aaPredicted RBP14.56□□□□□ -0.08
TPM1-228ENST00000560975 S100A13Q99584 98 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 HNRNPA1P09651 372 aaKnown RBP eCLIP14.56□□□□□ -0.08
TPM1-228ENST00000560975 SLC26A5P58743 744 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 KCNG3Q8TAE7 436 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 C1orf147Q96MC9 270 aaPredicted RBP14.56□□□□□ -0.08
TPM1-228ENST00000560975 NELFAQ9H3P2 528 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 TBX21Q9UL17 535 aa14.56□□□□□ -0.08
TPM1-228ENST00000560975 TGIF2-C20orf24A0A0A6YYL0 155 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 ATXN7O15265 892 aaPredicted RBP14.55□□□□□ -0.08
TPM1-228ENST00000560975 HIST1H2BKO60814 126 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms