RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 BABAM2Q9NXR7 383 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 MRM2Q9UI43 246 aaKnown RBP11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 A3GALT2U3KPV4 340 aa11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 CHD3Q12873 2000 aaKnown RBP11.88□□□□□ -0.51
PKNOX1-209ENST00000560448 SRSF10O75494 262 aaKnown RBP11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 NCR1O76036 304 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 IGLV3-1P01715 115 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 NR4A2P43354 598 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 GATA4P43694 442 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 SERPINB10P48595 397 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 BMXP51813 675 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 LOXL1Q08397 574 aaPredicted RBP11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 GPR50Q13585 617 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 RIN1Q13671 783 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 LIPNQ5VXI9 398 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 Q6ZR03 302 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 ELMOD2Q8IZ81 293 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 YIPF7Q8N8F6 280 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 OR8B12Q8NGG6 310 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 OR6Q1Q8NGQ2 317 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 TBX5Q99593 518 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 REG4Q9BYZ8 158 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 PBOV1Q9GZY1 135 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 PLGRKTQ9HBL7 147 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 BRD7Q9NPI1 651 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 TXNL4BQ9NX01 149 aaKnown RBP11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 SSR3Q9UNL2 185 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 MPC1Q9Y5U8 109 aa11.87□□□□□ -0.51
PKNOX1-209ENST00000560448 IGHV4-30-2A0A087WSY4 118 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 CLDN25C9JDP6 229 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 PSMD9O00233 223 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 RP2O75695 350 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 ZNF12P17014 697 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 FGF9P31371 208 aaPredicted RBP11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 GABRA5P31644 462 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 CD200P41217 278 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 MAP2K3P46734 347 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 GSK3AP49840 483 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 DCTN2Q13561 401 aaKnown RBP11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 ZNF181Q2M3W8 571 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 BCL2L15Q5TBC7 163 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 SSX6Q7RTT6 188 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 PEG10Q86TG7 708 aaKnown RBP11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 BIVMQ86UB2 503 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 OR5AS1Q8N127 324 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 RFLNBQ8N5W9 214 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 ZFP41Q8N8Y5 198 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 BHLHE23Q8NDY6 225 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 OR56B2PQ8NGI1 322 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 TIMD4Q96H15 378 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 AKIP1Q9NQ31 210 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 C14orf119Q9NWQ9 140 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 OR52A1Q9UKL2 312 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 N6AMT1Q9Y5N5 214 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 SIRT4Q9Y6E7 314 aaPredicted RBP11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 TRDV1A0A1B0GX56 115 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 PRR32B1ATL7 298 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 DHRS3O75911 302 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 LY6HO94772 140 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 FSTL3O95633 263 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 PTBP3O95758 552 aaKnown RBP11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 CST4P01036 141 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 HEXAP06865 529 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 USF1P22415 310 aaPredicted RBP11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 GNALP38405 381 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 FABP5Q01469 135 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 OR8G1Q15617 311 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 ZNF404Q494X3 552 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 FDX2Q6P4F2 183 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 Q6ZSR3 168 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 MCFD2Q8NI22 146 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 HPS1Q92902 700 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 C10orf35Q96D05 121 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 OR2V2Q96R30 315 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 MMP27Q9H306 513 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 EXOSC4Q9NPD3 245 aaKnown RBP11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 G6PC2Q9NQR9 355 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 ZNF319Q9P2F9 582 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 GNG8Q9UK08 70 aa11.86□□□□□ -0.51
PKNOX1-209ENST00000560448 ANXA2P2A6NMY6 339 aa11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 E9PI62 339 aa11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 H7C1Q1 480 aa11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 MLNRO43193 412 aa11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 TTRP02766 147 aa11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 UBCP0CG48 685 aaKnown RBP11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 CELP19835 753 aa11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 CCL1P22362 96 aa11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 GALP22466 123 aa11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 CPT2P23786 658 aa11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 RPS19P39019 145 aaKnown RBP11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 GPR6P46095 362 aaPredicted RBP11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 CCR9P51686 369 aa11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 OR12D2P58182 307 aa11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 CARTPTQ16568 116 aa11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 DOK3Q7L591 496 aa11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 COMMD2Q86X83 199 aa11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 CATSPERDQ86XM0 798 aa11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 C1orf87Q8N0U7 546 aa11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 MFSD4AQ8N468 514 aa11.85□□□□□ -0.51
PKNOX1-209ENST00000560448 SEMA6DQ8NFY4 1073 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms