RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 KLF9Q13886 244 aaPredicted RBP9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 GABRA6Q16445 453 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 MZT2BQ6NZ67 158 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 TMEM53Q6P2H8 277 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 MOB3CQ70IA8 216 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 SLC30A7Q8NEW0 376 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 OR56B2PQ8NGI1 322 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 OR4D10Q8NGI6 311 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 UBASH3BQ8TF42 649 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 TNFAIP8L1Q8WVP5 186 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 SNRNP40Q96DI7 357 aaKnown RBP9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 C1orf147Q96MC9 270 aaPredicted RBP9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 UQCC2Q9BRT2 126 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 GLRX2Q9NS18 164 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 NKIRAS2Q9NYR9 191 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 OR14I1A6ND48 311 aa9.4□□□□□ -0.91
SNRPA1-211ENST00000560433 RAB27BO00194 218 aa9.4□□□□□ -0.91
SNRPA1-211ENST00000560433 SOCS1O15524 211 aa9.4□□□□□ -0.91
SNRPA1-211ENST00000560433 ALDOBP05062 364 aa9.4□□□□□ -0.91
SNRPA1-211ENST00000560433 GABRA1P14867 456 aa9.4□□□□□ -0.91
SNRPA1-211ENST00000560433 PTGFRP43088 359 aa9.4□□□□□ -0.91
SNRPA1-211ENST00000560433 PCGF3Q3KNV8 242 aa9.4□□□□□ -0.91
SNRPA1-211ENST00000560433 RFPL4BQ6ZWI9 263 aa9.4□□□□□ -0.91
SNRPA1-211ENST00000560433 SSC4DQ8WTU2 575 aa9.4□□□□□ -0.91
SNRPA1-211ENST00000560433 PP6455Q8WZ26 134 aa9.4□□□□□ -0.91
SNRPA1-211ENST00000560433 ZNF75AQ96N20 296 aa9.4□□□□□ -0.91
SNRPA1-211ENST00000560433 SELENOIQ9C0D9 397 aa9.4□□□□□ -0.91
SNRPA1-211ENST00000560433 GP6Q9HCN6 339 aa9.4□□□□□ -0.91
SNRPA1-211ENST00000560433 ASF1BQ9NVP2 202 aa9.4□□□□□ -0.91
SNRPA1-211ENST00000560433 ZNF581Q9P0T4 197 aa9.4□□□□□ -0.91
SNRPA1-211ENST00000560433 POU2F3Q9UKI9 436 aa9.4□□□□□ -0.91
SNRPA1-211ENST00000560433 HEATR1Q9H583 2144 aaKnown RBP9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 CADP27708 2225 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 IGHV3-64DA0A0J9YX35 117 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 CTDSPLO15194 276 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 GSTZ1O43708 216 aaPredicted RBP9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 TMEM225BP0DP42 221 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 SLC6A1P30531 599 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 MNDAP41218 407 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 ID4P47928 161 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 TMPRSS3P57727 454 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 TGFBR3Q03167 851 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 PDCD1Q15116 288 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 PLCXD3Q63HM9 321 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 BAIAP2L2Q6UXY1 529 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 COLCA1Q6ZS62 124 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 GABRG1Q8N1C3 465 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 PAPOLGQ9BWT3 736 aaKnown RBP9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 NEK6Q9HC98 313 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 NUDT15Q9NV35 164 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 PROCRQ9UNN8 238 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 FLVCR2Q9UPI3 526 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 COL6A6A6NMZ7 2263 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 CDC14BO60729 498 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 TMEM127O75204 238 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 BPNT1O95861 308 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 SERPINA5P05154 406 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 PRF1P14222 555 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 BMP5P22003 454 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 PRSS3P35030 304 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 RBMXP38159 391 aaKnown RBP9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 SCAND1P57086 179 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 LINC00303Q3SY05 128 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 RPUSD3Q6P087 351 aaKnown RBP9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 Q6ZTK2 550 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 MRPL21Q7Z2W9 205 aaKnown RBP9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 GVQW1Q8N7I0 195 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 PNLDC1Q8NA58 520 aaKnown RBP9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 OR4S1Q8NGB4 309 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 OR6K3Q8NGY3 331 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 NUDCD2Q8WVJ2 157 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 LPAR5Q9H1C0 372 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 HRASLSQ9HDD0 168 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 PLSCR4Q9NRQ2 329 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 RAB22AQ9UL26 194 aa9.39□□□□□ -0.91
SNRPA1-211ENST00000560433 ESPL1Q14674 2120 aa9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 ITPR1Q14643 2758 aa9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 ARPC4-TTLL3A0A0A6YYG9 625 aa9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 MBD3L4A6NDZ8 208 aaPredicted RBP9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 MBD3L3A6NE82 208 aaPredicted RBP9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 MBD3L5A6NJ08 208 aaPredicted RBP9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 TMEM14DPA8MWL7 114 aa9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 XRCC2O43543 280 aa9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 CGAP01215 116 aa9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 IL2RAP01589 272 aa9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 ZNF14P17017 642 aaPredicted RBP9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 TATDN3Q17R31 274 aa9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 CDNFQ49AH0 187 aa9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 CLVS2Q5SYC1 327 aa9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 OR2T2Q6IF00 324 aa9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 OR2A2Q6IF42 318 aa9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 ZNF554Q86TJ5 538 aa9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 MBD3L2Q8NHZ7 208 aaPredicted RBP9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 APOBEC3DQ96AK3 386 aaPredicted RBP9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 SEH1LQ96EE3 360 aa9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 BORCS8Q96FH0 119 aa9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 RADILQ96JH8 1075 aa9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 REPIN1Q9BWE0 567 aaKnown RBP9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 TMEM59Q9BXS4 323 aa9.38□□□□□ -0.91
SNRPA1-211ENST00000560433 ICE1Q9Y2F5 2266 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms