RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 S100A11P31949 105 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 RPS10P46783 165 aaKnown RBP12.08□□□□□ -0.48
TRAF3-208ENST00000560371 HMGN3Q15651 99 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 STAC2Q6ZMT1 411 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 RHOUQ7L0Q8 258 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 OR10P1Q8NGE3 313 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 RND1Q92730 232 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 BTF3L4Q96K17 158 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 RBM14Q96PK6 669 aaKnown RBP12.08□□□□□ -0.48
TRAF3-208ENST00000560371 TAF9BQ9HBM6 251 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 MYOZ1Q9NP98 299 aaPredicted RBP12.08□□□□□ -0.48
TRAF3-208ENST00000560371 MMP25Q9NPA2 562 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 FREM3P0C091 2139 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 OR10K2Q6IF99 312 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 LRP12Q9Y561 859 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 ZGRF1Q86YA3 2104 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 SPAARA0A1B0GVQ0 90 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 HPP00738 406 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 AMER3Q8N944 861 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 CMTM3Q96MX0 182 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 NDFIP1Q9BT67 221 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 PATJQ8NI35 1801 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 SFTPCP11686 197 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 UBE2G1P62253 170 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 OCIAD1Q9NX40 245 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 ZNF407Q9C0G0 2248 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 TSTD3H0UI37 97 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 PIGPP57054 158 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 KLF3P57682 345 aaPredicted RBP12.07□□□□□ -0.48
TRAF3-208ENST00000560371 RNF151Q2KHN1 245 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 ADPRHL1Q8NDY3 354 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 OTOSQ8NHW6 89 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 NUDCD2Q8WVJ2 157 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 FUT7Q11130 342 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 DRAM2Q6UX65 266 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 C17orf107Q6ZR85 190 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 M1APQ8TC57 530 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 CFHR5Q9BXR6 569 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 SLC26A1Q9H2B4 701 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 CYC1P08574 325 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 THBS4P35443 961 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 FABP5Q01469 135 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 SPSB1Q96BD6 273 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 TXNL1O43396 289 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 OR2J3O76001 311 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 B3GNTL1Q67FW5 361 aaPredicted RBP12.07□□□□□ -0.48
TRAF3-208ENST00000560371 ARHGEF39Q8N4T4 335 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 IL20Q9NYY1 176 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 FANCMQ8IYD8 2048 aa12.07□□□□□ -0.48
TRAF3-208ENST00000560371 TMEM30CPA0ZSE6 113 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 PATE3B3GLJ2 98 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 NUPL2O15504 423 aaKnown RBP12.06□□□□□ -0.48
TRAF3-208ENST00000560371 TAS2R45P59539 299 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 RAE1P78406 368 aaKnown RBP12.06□□□□□ -0.48
TRAF3-208ENST00000560371 DBX2Q6ZNG2 339 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 SLC51BQ86UW2 128 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 IGHV5-10-1A0A0J9YXX1 117 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 OR7C2O60412 319 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 OR5H8P0DN80 308 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 TMEM268Q5VZI3 342 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 NUBPLQ8TB37 319 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 MCHR2Q969V1 340 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 CIB3Q96Q77 187 aaPredicted RBP12.06□□□□□ -0.48
TRAF3-208ENST00000560371 RNF167Q9H6Y7 350 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 GOLT1BQ9Y3E0 138 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 XIRP1Q702N8 1843 aaKnown RBP12.06□□□□□ -0.48
TRAF3-208ENST00000560371 A0A0B4J2E0 115 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 A0A1B0GX12 115 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 CCSO14618 274 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 CD82P27701 267 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 KIR2DL1P43626 348 aaPredicted RBP12.06□□□□□ -0.48
TRAF3-208ENST00000560371 MNX1P50219 401 aaPredicted RBP12.06□□□□□ -0.48
TRAF3-208ENST00000560371 SOX7Q9BT81 388 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 SPRY1O43609 319 aaPredicted RBP12.06□□□□□ -0.48
TRAF3-208ENST00000560371 FAM58AQ8N1B3 248 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 TAAR6Q96RI8 345 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 SBK3P0C264 359 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 RAC3P60763 192 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 FCN2Q15485 313 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 OR2T2Q6IF00 324 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 PATZ1Q9HBE1 687 aaKnown RBP12.06□□□□□ -0.48
TRAF3-208ENST00000560371 SIX6O95475 246 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 ZNF32P17041 273 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 CA6P23280 308 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 PRDX4Q13162 271 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 TMPRSS11FQ6ZWK6 438 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 SIGLEC7Q9Y286 467 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 SHANK1Q9Y566 2161 aa12.06□□□□□ -0.48
TRAF3-208ENST00000560371 CD3EP07766 207 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 CD1EP15812 388 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 ATF1P18846 271 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 TNFAIP6P98066 277 aaPredicted RBP12.05□□□□□ -0.48
TRAF3-208ENST00000560371 ZXDAP98168 799 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 BAMBIQ13145 260 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 CLPPQ16740 277 aaPredicted RBP12.05□□□□□ -0.48
TRAF3-208ENST00000560371 PLAC9Q5JTB6 97 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 TMEM179BQ7Z7N9 219 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 RASL10BQ96S79 203 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 BARX1Q9HBU1 254 aaPredicted RBP12.05□□□□□ -0.48
TRAF3-208ENST00000560371 STRAPQ9Y3F4 350 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms