RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 CDIPTO14735 213 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 CST4P01036 141 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 OSMP13725 252 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 ANXA8P13928 327 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 RPS7P62081 194 aaKnown RBP10.13□□□□□ -0.79
SPG11-219ENST00000559822 GUCA2AQ02747 115 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 POU4F2Q12837 409 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 PRDX4Q13162 271 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 OLFML2AQ68BL7 652 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 KCTD18Q6PI47 426 aaPredicted RBP10.13□□□□□ -0.79
SPG11-219ENST00000559822 METAP1DQ6UB28 335 aaPredicted RBP10.13□□□□□ -0.79
SPG11-219ENST00000559822 KCTD8Q6ZWB6 473 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 LDLRAD3Q86YD5 345 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 KIR3DL3Q8N743 410 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 NPRL2Q8WTW4 380 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 AMELYQ99218 206 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 THTPAQ9BU02 230 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 DPAGT1Q9H3H5 408 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 HAO2Q9NYQ3 351 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 TAS2R1Q9NYW7 299 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 ONECUT1Q9UBC0 465 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 LAMP5Q9UJQ1 280 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 FAM96BQ9Y3D0 163 aa10.13□□□□□ -0.79
SPG11-219ENST00000559822 BTBD17A6NE02 478 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 ACOD1A6NK06 481 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 ZNF850A8MQ14 1090 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 ACOT8O14734 319 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 WIPF1O43516 503 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 SELENOFO60613 162 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 EEF1B2P24534 225 aaKnown RBP10.12□□□□□ -0.79
SPG11-219ENST00000559822 ATPAF1Q5TC12 328 aaPredicted RBP10.12□□□□□ -0.79
SPG11-219ENST00000559822 LCN1P1Q5VSP4 162 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 STUMQ69YW2 141 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 GDPGP1Q6ZNW5 385 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 VMO1Q7Z5L0 202 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 KRT77Q7Z794 578 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 CPOQ8IVL8 374 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 ZDHHC23Q8IYP9 409 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 LY6G5BQ8NDX9 201 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 FAM81AQ8TBF8 368 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 CANT1Q8WVQ1 401 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 WFDC12Q8WWY7 111 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 DNAJC9Q8WXX5 260 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 OR5P3Q8WZ94 311 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 MED30Q96HR3 178 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 RNF170Q96K19 258 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 CLPTM1LQ96KA5 538 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 PKP2Q99959 881 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 C1RLQ9NZP8 487 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 ZNF319Q9P2F9 582 aa10.12□□□□□ -0.79
SPG11-219ENST00000559822 A0A0U1RQV5 110 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 ZNF816-ZNF321PA0A0X1KG74 233 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 CLPSL1A2RUU4 121 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.11□□□□□ -0.79
SPG11-219ENST00000559822 FBP1P09467 338 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 T-ENOLP0DO92 83 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 ATP6V1B1P15313 513 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 ACKR3P25106 362 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 MAP2K3P46734 347 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 TGM4P49221 684 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 CDK5Q00535 292 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 IKZF1Q13422 519 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 FLOT2Q14254 428 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 DNAL1Q4LDG9 190 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 FAM76BQ5HYJ3 339 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 DEGS2Q6QHC5 323 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 SPATA24Q86W54 205 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 FAM216BQ8N7L0 139 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 C8orf46Q8TAG6 207 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 H1FXQ92522 213 aaKnown RBP10.11□□□□□ -0.79
SPG11-219ENST00000559822 PIGCQ92535 297 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 RAB3IPQ96QF0 476 aaPredicted RBP10.11□□□□□ -0.79
SPG11-219ENST00000559822 DCTN5Q9BTE1 182 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 MROQ9BYG7 248 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 PRRG3Q9BZD7 231 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 YIPF3Q9GZM5 350 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 SLC25A19Q9HC21 320 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 LRP12Q9Y561 859 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 TMEM14AQ9Y6G1 99 aa10.11□□□□□ -0.79
SPG11-219ENST00000559822 A0A0U1RQK1 487 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 TIMM23O14925 209 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 GPR137BO60478 399 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 FCN3O75636 299 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 ALOX5APP20292 161 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 DCTDP32321 178 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 IER3P46695 156 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 GMFBP60983 142 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 GNG3P63215 75 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 CBX1P83916 185 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 APOFQ13790 326 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 BLMHQ13867 455 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 SNAPC1Q16533 368 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 ZNF829Q3KNS6 432 aaPredicted RBP10.1□□□□□ -0.79
SPG11-219ENST00000559822 NCR3LG1Q68D85 454 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 BRICD5Q6PL45 260 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 ZNF788Q6ZQV5 615 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 C1orf122Q6ZSJ8 110 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 THAP5Q7Z6K1 395 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 TMEM179BQ7Z7N9 219 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 COMMD2Q86X83 199 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms