RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 PRAMEF6Q5VXH4 476 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 WDR25Q64LD2 544 aaPredicted RBP4.8□□□□□ -1.64
USP3-215ENST00000559771 XAF1Q6GPH4 301 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 SLC27A4Q6P1M0 643 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 LRRN1Q6UXK5 716 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 ZNF730Q6ZMV8 503 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 SPATC1Q76KD6 591 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 PRSS48Q7RTY5 328 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 ANKRD13BQ86YJ7 626 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 OR6V1Q8N148 313 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 LINC00471Q8N535 108 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 KIR3DL3Q8N743 410 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 BHLHE23Q8NDY6 225 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 SLC26A10Q8NG04 563 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 OR13G1Q8NGZ3 307 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 Q8TCH9 128 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 GIPC3Q8TF64 312 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 MUL1Q969V5 352 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 APOBEC3DQ96AK3 386 aaPredicted RBP4.8□□□□□ -1.64
USP3-215ENST00000559771 C12orf43Q96C57 262 aaKnown RBP4.8□□□□□ -1.64
USP3-215ENST00000559771 NEIL1Q96FI4 390 aaPredicted RBP4.8□□□□□ -1.64
USP3-215ENST00000559771 DHRS1Q96LJ7 313 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 COG8Q96MW5 612 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 TBX15Q96SF7 602 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 COQ7Q99807 217 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 NUDT16L1Q9BRJ7 211 aaKnown RBP4.8□□□□□ -1.64
USP3-215ENST00000559771 CHIAQ9BZP6 476 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 MARCH7Q9H992 704 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 ZNF556Q9HAH1 456 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 SMURF1Q9HCE7 757 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 KRT84Q9NSB2 600 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 NDUFAF4Q9P032 175 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 KIF17Q9P2E2 1029 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 MIOXQ9UGB7 285 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 FAM32AQ9Y421 112 aaKnown RBP4.8□□□□□ -1.64
USP3-215ENST00000559771 GMPPBQ9Y5P6 360 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 IER3IP1Q9Y5U9 82 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 ENPP4Q9Y6X5 453 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 V9GYQ6 96 aa4.8□□□□□ -1.64
USP3-215ENST00000559771 CENPVL3A0A0U1RRI6 287 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 A0A1W2PRQ8 180 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 OR6C68A6NDL8 312 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 IFNL4K9M1U5 179 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 TNFRSF11BO00300 401 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 XKRYO14609 159 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 FAM20BO75063 409 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 DIRAS1O95057 198 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 NDUFA7O95182 113 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 CLIC3O95833 236 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 BPNT1O95861 308 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 FPR3P25089 353 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 CFHR2P36980 270 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 CD200P41217 278 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 MTNR1AP48039 350 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 SERPINB10P48595 397 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 SRP9P49458 86 aaKnown RBP4.79□□□□□ -1.64
USP3-215ENST00000559771 DAPP51397 102 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 IL5RAQ01344 420 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 DGCR6Q14129 220 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 MICAQ29983 383 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 ZIK1Q3SY52 487 aaPredicted RBP4.79□□□□□ -1.64
USP3-215ENST00000559771 ZNF362Q5T0B9 420 aaPredicted RBP4.79□□□□□ -1.64
USP3-215ENST00000559771 GPR107Q5VW38 600 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 GPR139Q6DWJ6 353 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 SLC18B1Q6NT16 456 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 FIP1L1Q6UN15 594 aaKnown RBP4.79□□□□□ -1.64
USP3-215ENST00000559771 BTNL3Q6UXE8 466 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 DPY19L2P2Q6ZN68 376 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 DCDC5Q6ZRR9 648 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 ADCK1Q86TW2 530 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 CYP4Z1Q86W10 505 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 LINC00346Q8IVM7 164 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 FGFRL1Q8N441 504 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 CELF2-AS1Q8N7Q2 184 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 ZNRF4Q8WWF5 429 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 TRUB1Q8WWH5 349 aaKnown RBP4.79□□□□□ -1.64
USP3-215ENST00000559771 S100ZQ8WXG8 99 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 RORBQ92753 470 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 MYDGFQ969H8 173 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 BORCS5Q969J3 196 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 MAP6Q96JE9 813 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 ZNF582Q96NG8 517 aaPredicted RBP4.79□□□□□ -1.64
USP3-215ENST00000559771 DDOQ99489 341 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 KRTAP3-1Q9BYR8 98 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 HDHD2Q9H0R4 259 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 SIRPDQ9H106 197 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 ANKRD19PQ9H560 264 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 RERGLQ9H628 205 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 TNFRSF19Q9NS68 423 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 TBC1D23Q9NUY8 699 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 TMEM100Q9NV29 134 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 MRPL22Q9NWU5 206 aaKnown RBP4.79□□□□□ -1.64
USP3-215ENST00000559771 TMCC3Q9ULS5 477 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 B9D1Q9UPM9 204 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 A3GALT2U3KPV4 340 aa4.79□□□□□ -1.64
USP3-215ENST00000559771 A0A1B0GW55 424 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 CLPSL1A2RUU4 121 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 UNC119BA6NIH7 251 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 ZNF879B4DU55 563 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms