RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 IFNL4K9M1U5 179 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 ZNF593O00488 134 aaPredicted RBP6.09□□□□□ -1.43
SPG11-213ENST00000558988 BHLHE40O14503 412 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 ADAM20O43506 726 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 IDH3BO43837 385 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 KRT36O76013 467 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 GYPAP02724 150 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 SFTPBP07988 381 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 EGR1P18146 543 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 PRTN3P24158 256 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 POU1F1P28069 291 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 HSD11B1P28845 292 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 FMO3P31513 532 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 ENTPD1P49961 510 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 EIF2B1Q14232 305 aaKnown RBP6.09□□□□□ -1.43
SPG11-213ENST00000558988 ZNF404Q494X3 552 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 RPL13AP3Q6NVV1 102 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 LRRN1Q6UXK5 716 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 DOK3Q7L591 496 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 ZBTB46Q86UZ6 589 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 DHFR2Q86XF0 187 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 ERI1Q8IV48 349 aaKnown RBP6.09□□□□□ -1.43
SPG11-213ENST00000558988 PDZD9Q8IXQ8 264 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 OR6N2Q8NGY6 317 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 OR4Q3Q8NH05 313 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 OR8S1Q8NH09 359 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 TEX47Q8TBZ9 253 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 RAB40AQ8WXH6 277 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 SLC25A28Q96A46 364 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 SLAMF6Q96DU3 332 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 ZMYND19Q96E35 227 aaPredicted RBP6.09□□□□□ -1.43
SPG11-213ENST00000558988 LRGUKQ96M69 825 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 C1orf147Q96MC9 270 aaPredicted RBP6.09□□□□□ -1.43
SPG11-213ENST00000558988 MARCH7Q9H992 704 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 TAS2R1Q9NYW7 299 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 DOCK11Q5JSL3 2073 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 ANKRD30BLA7E2S9 258 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 ZNF878C9JN71 531 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 LGALS8O00214 317 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 GNGT2O14610 69 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 PHYHO14832 338 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 HOXA3O43365 443 aaPredicted RBP6.08□□□□□ -1.44
SPG11-213ENST00000558988 ENSAO43768 121 aaKnown RBP6.08□□□□□ -1.44
SPG11-213ENST00000558988 ZFPL1O95159 310 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 IFNGP01579 166 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 HKR1P10072 659 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 SPI1P17947 270 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 CD200P41217 278 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 MTNR1AP48039 350 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 CX3CR1P49238 355 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 COMPP49747 757 aaPredicted RBP6.08□□□□□ -1.44
SPG11-213ENST00000558988 PRB3Q04118 309 aaPredicted RBP6.08□□□□□ -1.44
SPG11-213ENST00000558988 PAX8Q06710 450 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 SLC9A3R2Q15599 337 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 TIGD6Q17RP2 521 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 DEFB112Q30KQ8 113 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 FAM98BQ52LJ0 330 aaKnown RBP6.08□□□□□ -1.44
SPG11-213ENST00000558988 GPR157Q5UAW9 335 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 WDR25Q64LD2 544 aaPredicted RBP6.08□□□□□ -1.44
SPG11-213ENST00000558988 OR2T5Q6IEZ7 315 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 DRAM2Q6UX65 266 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 DCDC5Q6ZRR9 648 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 COLCA1Q6ZS62 124 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 RASSF6Q6ZTQ3 369 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 FAM57BQ71RH2 274 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 OR2T33Q8NG76 320 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 OR10G2Q8NGC3 310 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 OR4C15Q8NGM1 316 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 OR2T29Q8NH02 315 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 ST8SIA4Q92187 359 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 CLPTM1LQ96KA5 538 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 INTS14Q96SY0 518 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 PAPOLGQ9BWT3 736 aaKnown RBP6.08□□□□□ -1.44
SPG11-213ENST00000558988 OR51V1Q9H2C8 321 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 UNKLQ9H9P5 680 aaKnown RBP6.08□□□□□ -1.44
SPG11-213ENST00000558988 ACTR3BQ9P1U1 418 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 ERVK-18Q9QC07 812 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 CTSZQ9UBR2 303 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 DNAJB11Q9UBS4 358 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 KCNG2Q9UJ96 466 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 NOP16Q9Y3C1 178 aaKnown RBP6.08□□□□□ -1.44
SPG11-213ENST00000558988 CUBNO60494 3623 aa6.08□□□□□ -1.44
SPG11-213ENST00000558988 A0A1W2PRD5 423 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 A0A1W2PRF3 423 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 A0A1W2PRM7 423 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 DHRS12A0PJE2 317 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 OOEPA6NGQ2 149 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 XRCC2O43543 280 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 GMDSO60547 372 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 TOX4O94842 621 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 CRYBA1P05813 215 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 ZNF3P17036 446 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 NAA10P41227 235 aaPredicted RBP6.07□□□□□ -1.44
SPG11-213ENST00000558988 SLC15A1P46059 708 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 MNAT1P51948 309 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 ZNF121P58317 390 aaPredicted RBP6.07□□□□□ -1.44
SPG11-213ENST00000558988 RPS7P62081 194 aaKnown RBP6.07□□□□□ -1.44
SPG11-213ENST00000558988 CSNK2BP67870 215 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 ELF3P78545 371 aaPredicted RBP6.07□□□□□ -1.44
SPG11-213ENST00000558988 MICAQ29983 383 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms