RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 PARPBPQ9NWS1 579 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 B4GALT7Q9UBV7 327 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 TIMM10BQ9Y5J6 103 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 TNRC6BQ9UPQ9 1833 aaKnown RBP7.31□□□□□ -1.24
SPG11-209ENST00000558253 UNC13CQ8NB66 2214 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 A0A0J9YW62 118 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 RPS10-NUDT3A0A1W2PQS6 291 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 C9orf170A2RU37 121 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 OR6C6A6NF89 314 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 OR5H14A6NHG9 310 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 ZNF814B7Z6K7 855 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 M0QYG6 137 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 M0R135 149 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 FARS2O95363 451 aaKnown RBP7.3□□□□□ -1.24
SPG11-209ENST00000558253 MPIG6BO95866 241 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 HLA-AP01891 365 aaKnown RBP7.3□□□□□ -1.24
SPG11-209ENST00000558253 GNB3P16520 340 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 PRKACAP17612 351 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 CXCL2P19875 107 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 CD96P40200 585 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 PMELP40967 661 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 RGS19P49795 217 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 IL13RA1P78552 427 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 CNN3Q15417 329 aaKnown RBP7.3□□□□□ -1.24
SPG11-209ENST00000558253 INPP5JQ15735 1006 aaPredicted RBP7.3□□□□□ -1.24
SPG11-209ENST00000558253 KRTAP27-1Q3LI81 207 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 MOGAT2Q3SYC2 334 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 SCGB2B2Q4G0G5 96 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 TMEM128Q5BJH2 165 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 ABLIM2Q6H8Q1 611 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 GSG1LQ6UXU4 331 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 AAED1Q7RTV5 226 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 TMED4Q7Z7H5 227 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 DPPA2Q7Z7J5 298 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 ZNF546Q86UE3 836 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 SULF2Q8IWU5 870 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 SEMA6DQ8NFY4 1073 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 OR5T2Q8NGG2 359 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 OR52B4Q8NGK2 314 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 OR1F12Q8NHA8 337 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 LILRB1Q8NHL6 650 aaPredicted RBP7.3□□□□□ -1.24
SPG11-209ENST00000558253 NKD1Q969G9 470 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 FBXW5Q969U6 566 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 ZNF799Q96GE5 643 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 C1orf147Q96MC9 270 aaPredicted RBP7.3□□□□□ -1.24
SPG11-209ENST00000558253 JSRP1Q96MG2 331 aaPredicted RBP7.3□□□□□ -1.24
SPG11-209ENST00000558253 FAM173AQ9BQD7 235 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 LINC00470Q9BZP3 86 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 CHST6Q9GZX3 395 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 MFFQ9GZY8 342 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 DNTTIP1Q9H147 329 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 SLC25A32Q9H2D1 315 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 RNF122Q9H9V4 155 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 FSCN3Q9NQT6 498 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 TMEM38BQ9NVV0 291 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 PFDN2Q9UHV9 154 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 KCNK7Q9Y2U2 307 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 NOP16Q9Y3C1 178 aaKnown RBP7.3□□□□□ -1.24
SPG11-209ENST00000558253 LOXL2Q9Y4K0 774 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 MPDZO75970 2070 aa7.3□□□□□ -1.24
SPG11-209ENST00000558253 SEC16AO15027 2179 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 IGKV3D-15A0A087WSY6 115 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 FXYD6-FXYD2A0A087WZ82 144 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 LOC101059948A0A1B0GTJ6 334 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 KANTRA0A1W2PQU2 76 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 MEIS3P1A6NDR6 274 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 ADARB2-AS1A8MUL3 147 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 KRBOX1C9JBD0 128 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 TRIM77I1YAP6 450 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 MFNGO00587 321 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 TOR1AO14656 332 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 TNFSF11O14788 317 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 SMAD9O15198 467 aaKnown RBP7.29□□□□□ -1.24
SPG11-209ENST00000558253 ARPC5O15511 151 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 RRP8O43159 456 aaKnown RBP7.29□□□□□ -1.24
SPG11-209ENST00000558253 SGCEO43556 437 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 CYTIPO60759 359 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 CRTAPO75718 401 aaPredicted RBP7.29□□□□□ -1.24
SPG11-209ENST00000558253 OPN1LWP04000 364 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 JMJD7P0C870 316 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 ABOP16442 354 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 TCN2P20062 427 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 CRYGSP22914 178 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 FPR2P25090 351 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 GRNP28799 593 aaKnown RBP7.29□□□□□ -1.24
SPG11-209ENST00000558253 SSTR2P30874 369 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 HRH1P35367 487 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 OR3A2P47893 321 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 SLC6A9P48067 706 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 ARFRP1Q13795 201 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 OR10K2Q6IF99 312 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 C11orf87Q6NUJ2 197 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 ASCL4Q6XD76 172 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 ACOT7LQ6ZUV0 252 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 LHFPL2Q6ZUX7 228 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 RAB11FIP2Q7L804 512 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 COMMD7Q86VX2 200 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 KCNRGQ8N5I3 272 aa7.29□□□□□ -1.24
SPG11-209ENST00000558253 EIF4E3Q8N5X7 224 aaKnown RBP7.29□□□□□ -1.24
SPG11-209ENST00000558253 ZBTB44Q8NCP5 570 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms