RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 LCN1P1Q5VSP4 162 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 LYPD2Q6UXB3 125 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 KRT77Q7Z794 578 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 ZDHHC13Q8IUH4 622 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 C11orf53Q8IXP5 236 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 PNLDC1Q8NA58 520 aaKnown RBP8.41□□□□□ -1.06
USP3-207ENST00000558218 OR1M1Q8NGA1 313 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 OR10Z1Q8NGY1 313 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 AMELYQ99218 206 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 MICU1Q9BPX6 476 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 DNTTIP1Q9H147 329 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 HAO2Q9NYQ3 351 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 TVP23BQ9NYZ1 205 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 H2AFY2Q9P0M6 372 aaPredicted RBP8.41□□□□□ -1.06
USP3-207ENST00000558218 KIF17Q9P2E2 1029 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 ZNF69Q9UC07 566 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 AP4S1Q9Y587 144 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 SLC22A31A6NKX4 558 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 P2RY10O00398 339 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 ADAM20O43506 726 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 SELENOFO60613 162 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 ANOS1P23352 680 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 RBMXP38159 391 aaKnown RBP8.4□□□□□ -1.06
USP3-207ENST00000558218 UBA52P62987 128 aaKnown RBP8.4□□□□□ -1.06
USP3-207ENST00000558218 ACTG1P63261 375 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 FOXL1Q12952 345 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 HNRNPA0Q13151 305 aaKnown RBP8.4□□□□□ -1.06
USP3-207ENST00000558218 APOFQ13790 326 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 NXNL2Q5VZ03 156 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 TMEM236Q5W0B7 351 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 KDM4DQ6B0I6 523 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 SFRP4Q6FHJ7 346 aaPredicted RBP8.4□□□□□ -1.06
USP3-207ENST00000558218 MEPCEQ7L2J0 689 aaKnown RBP8.4□□□□□ -1.06
USP3-207ENST00000558218 SLC36A1Q7Z2H8 476 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 ZNF679Q8IYX0 411 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 OR5P3Q8WZ94 311 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 HIST1H2AAQ96QV6 131 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 RTL8AQ9BWD3 113 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 PAPOLGQ9BWT3 736 aaKnown RBP8.4□□□□□ -1.06
USP3-207ENST00000558218 DNAJC27Q9NZQ0 273 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 RHBDD3Q9Y3P4 386 aa8.4□□□□□ -1.06
USP3-207ENST00000558218 TMEM269A0A1B0GVZ9 245 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 hCG_1807616A0A1W2PRN6 198 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 SRRM5B3KS81 715 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 ZNF879B4DU55 563 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 MTRF1O75570 445 aaKnown RBP8.39□□□□□ -1.07
USP3-207ENST00000558218 HKR1P10072 659 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 TMED1Q13445 227 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 PDCD1Q15116 288 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 GPR157Q5UAW9 335 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 C1orf146Q5VVC0 180 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 SLX4IPQ5VYV7 408 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 WDR82Q6UXN9 313 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 ZNF826PQ6ZT77 177 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 WDR86Q86TI4 376 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 FAM90A1Q86YD7 464 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 Q8N3U1 123 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 SIGLECL1Q8N7X8 197 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 BBS1Q8NFJ9 593 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 OR8B12Q8NGG6 310 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 OR5A2Q8NGI9 324 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 LRRC29Q8WV35 223 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 C22orf15Q8WYQ4 148 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 SLC25A28Q96A46 364 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 OR8B4Q96RC9 309 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 GABARAPL1Q9H0R8 117 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 NOX4Q9NPH5 578 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 ESM1Q9NQ30 184 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 KRT84Q9NSB2 600 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 FAM206AQ9NX38 181 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 CTSZQ9UBR2 303 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 LRP12Q9Y561 859 aa8.39□□□□□ -1.07
USP3-207ENST00000558218 ZNF816-ZNF321PA0A0X1KG74 233 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 SCO2A0A1W2PP80 73 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 CCDC182A6NF36 153 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 ZAR1LA6NP61 321 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 ZNF850A8MQ14 1090 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 C22orf46C9J442 243 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 DVL1O14640 695 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 CDIPTO14735 213 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 TMPRSS2O15393 492 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 PRKYO43930 277 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 IGLV3-1P01715 115 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 RNASE1P07998 156 aaKnown RBP8.38□□□□□ -1.07
USP3-207ENST00000558218 CFPP27918 469 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 TGM4P49221 684 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 RIDAP52758 137 aaKnown RBP8.38□□□□□ -1.07
USP3-207ENST00000558218 FGF12P61328 243 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 GNG3P63215 75 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 EGR3Q06889 387 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 RIPPLY1Q0D2K3 151 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 BAMBIQ13145 260 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 PRDX4Q13162 271 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 ZNF829Q3KNS6 432 aaPredicted RBP8.38□□□□□ -1.07
USP3-207ENST00000558218 CEACAM21Q3KPI0 293 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 AADACL4Q5VUY2 407 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 C12orf73Q69YU5 71 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 GID4Q8IVV7 300 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 C10orf67Q8IYJ2 551 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 C3orf56Q8N813 242 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms