RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 NFYBP25208 207 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 THBS4P35443 961 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 C14orf28Q4W4Y0 310 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 D2HGDHQ8N465 521 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 ZNF561Q8N587 486 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 OR6X1Q8NH79 312 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 OR1L3Q8NH93 324 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 SLC25A43Q8WUT9 341 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-231ENST00000557433 ZNF775Q96BV0 537 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-231ENST00000557433 GSKIPQ9P0R6 139 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 CACFD1Q9UGQ2 172 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 RHPN2P1A8MT19 583 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 NME2P22392 152 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 GLRA1P23415 457 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 DHPSP49366 369 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-231ENST00000557433 UCP2P55851 309 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 FOXF1Q12946 379 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 RBM39Q14498 530 aaKnown RBP14.35□□□□□ -0.11
SHMT2-231ENST00000557433 HABP2Q14520 560 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-231ENST00000557433 IAH1Q2TAA2 248 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-231ENST00000557433 SLC16A14Q7RTX9 510 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 SGPP2Q8IWX5 399 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 OR9K2Q8NGE7 335 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 OR14K1Q8NGZ2 314 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 C10orf35Q96D05 121 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 CPNE2Q96FN4 548 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-231ENST00000557433 PRRX2Q99811 253 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 ST6GALNAC5Q9BVH7 336 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 ARV1Q9H2C2 271 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 DECR2Q9NUI1 292 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 SEMA5BQ9P283 1151 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 EDARQ9UNE0 448 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 STARD10Q9Y365 291 aa14.35□□□□□ -0.11
SHMT2-231ENST00000557433 THADAQ6YHU6 1953 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 IGLV3-32A0A0A0MS00 114 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 PMS2P1A4D2B8 440 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 UBE2CO00762 179 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 SERPINA5P05154 406 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 SFTPBP07988 381 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 HOXB5P09067 269 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 ZNF17P17021 662 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 CPT2P23786 658 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 FKBP2P26885 142 aaKnown RBP14.34□□□□□ -0.11
SHMT2-231ENST00000557433 CD80P33681 288 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 PTGFRP43088 359 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 RAB5CP51148 216 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 ZNF41P51814 821 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-231ENST00000557433 SUCLG1P53597 346 aaKnown RBP14.34□□□□□ -0.11
SHMT2-231ENST00000557433 ZNF239Q16600 458 aaKnown RBP14.34□□□□□ -0.11
SHMT2-231ENST00000557433 DHRS11Q6UWP2 260 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 Q6ZRG5 221 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 KMT5CQ86Y97 462 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 PLXDC1Q8IUK5 500 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 BHLHE23Q8NDY6 225 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 TAAR9Q96RI9 348 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 EMC6Q9BV81 110 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 PECRQ9BY49 303 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 TGIF2Q9GZN2 237 aa14.34□□□□□ -0.11
SHMT2-231ENST00000557433 C5orf52A6NGY3 159 aa14.33□□□□□ -0.11
SHMT2-231ENST00000557433 SEC11BP0C7V7 166 aa14.33□□□□□ -0.11
SHMT2-231ENST00000557433 ATXN8OSP0DMR3 200 aa14.33□□□□□ -0.11
SHMT2-231ENST00000557433 PI3P19957 117 aa14.33□□□□□ -0.11
SHMT2-231ENST00000557433 FCGR2CP31995 323 aa14.33□□□□□ -0.11
SHMT2-231ENST00000557433 ZNF133P52736 654 aaPredicted RBP14.33□□□□□ -0.11
SHMT2-231ENST00000557433 RTN4RL2Q86UN3 420 aa14.33□□□□□ -0.11
SHMT2-231ENST00000557433 LURAP1LQ8IV03 231 aa14.33□□□□□ -0.11
SHMT2-231ENST00000557433 SULF2Q8IWU5 870 aa14.33□□□□□ -0.11
SHMT2-231ENST00000557433 C7orf61Q8IZ16 206 aa14.33□□□□□ -0.11
SHMT2-231ENST00000557433 PP6455Q8WZ26 134 aa14.33□□□□□ -0.11
SHMT2-231ENST00000557433 FAM71F1Q96KD3 344 aaPredicted RBP14.33□□□□□ -0.11
SHMT2-231ENST00000557433 SPACA5Q96QH8 159 aa14.33□□□□□ -0.11
SHMT2-231ENST00000557433 PNRC2Q9NPJ4 139 aaKnown RBP14.33□□□□□ -0.11
SHMT2-231ENST00000557433 CLEC1BQ9P126 229 aa14.33□□□□□ -0.11
SHMT2-231ENST00000557433 BORCS7-ASMTA0A0B4J1R7 106 aa14.33□□□□□ -0.12
SHMT2-231ENST00000557433 LOC102725191A0A1B0GVB3 256 aa14.33□□□□□ -0.12
SHMT2-231ENST00000557433 LMO7DNF2Z398 122 aa14.33□□□□□ -0.12
SHMT2-231ENST00000557433 EIF3GO75821 320 aaKnown RBP eCLIP14.33□□□□□ -0.12
SHMT2-231ENST00000557433 HTR3BO95264 441 aa14.33□□□□□ -0.12
SHMT2-231ENST00000557433 IGLV3-1P01715 115 aa14.33□□□□□ -0.12
SHMT2-231ENST00000557433 S100A6P06703 90 aa14.33□□□□□ -0.12
SHMT2-231ENST00000557433 RCC1P18754 421 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-231ENST00000557433 BLVRBP30043 206 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-231ENST00000557433 KISS1Q15726 138 aa14.33□□□□□ -0.12
SHMT2-231ENST00000557433 ZNF283Q8N7M2 679 aa14.33□□□□□ -0.12
SHMT2-231ENST00000557433 C2CD4CQ8TF44 421 aa14.33□□□□□ -0.12
SHMT2-231ENST00000557433 ZNF251Q9BRH9 671 aa14.33□□□□□ -0.12
SHMT2-231ENST00000557433 SLC7A5P2Q9GIP4 190 aa14.33□□□□□ -0.12
SHMT2-231ENST00000557433 FBXL17Q9UF56 701 aa14.33□□□□□ -0.12
SHMT2-231ENST00000557433 A0A0U1RQV5 110 aa14.32□□□□□ -0.12
SHMT2-231ENST00000557433 E5RGE8 158 aa14.32□□□□□ -0.12
SHMT2-231ENST00000557433 TLX3O43711 291 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-231ENST00000557433 TSPAN15O95858 294 aa14.32□□□□□ -0.12
SHMT2-231ENST00000557433 HPNP05981 417 aa14.32□□□□□ -0.12
SHMT2-231ENST00000557433 CD38P28907 300 aa14.32□□□□□ -0.12
SHMT2-231ENST00000557433 PTGER4P35408 488 aa14.32□□□□□ -0.12
SHMT2-231ENST00000557433 FBXW4P57775 412 aa14.32□□□□□ -0.12
SHMT2-231ENST00000557433 LSM6P62312 80 aaKnown RBP14.32□□□□□ -0.12
SHMT2-231ENST00000557433 MYBPHQ13203 477 aa14.32□□□□□ -0.12
SHMT2-231ENST00000557433 HIST3H3Q16695 136 aa14.32□□□□□ -0.12
SHMT2-231ENST00000557433 GPR157Q5UAW9 335 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms