RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 RPS4Y2Q8TD47 263 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 HS3ST1O14792 307 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 GAB4Q2WGN9 574 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 OR2A2Q6IF42 318 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 SSX8Q7RTT4 187 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 OR52N4Q8NGI2 321 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 OR2G2Q8NGZ5 317 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 DTD1Q8TEA8 209 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 SAP30LQ9HAJ7 183 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 CACNG5Q9UF02 275 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 TNFRSF10CO14798 259 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 HLA-GP17693 338 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 IL13RA2Q14627 380 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 CADM3Q8N126 398 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 F13BP05160 661 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 SCAMP4Q969E2 229 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 FREM3P0C091 2139 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 ZADH2Q8N4Q0 377 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 NMNAT3Q96T66 252 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 LOC107986453A0A1B0GWG9 222 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 PGGT1BP53609 377 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 ZXDAP98168 799 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 ZXDBP98169 803 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 CTU1Q7Z7A3 348 aaKnown RBP8.03□□□□□ -1.12
SYNE3-205ENST00000557275 SORT1Q99523 831 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 PTGDR2Q9Y5Y4 395 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 SOX21Q9Y651 276 aaPredicted RBP8.03□□□□□ -1.12
SYNE3-205ENST00000557275 NPIPB6E9PJ23 425 aa8.02□□□□□ -1.12
SYNE3-205ENST00000557275 P01737 135 aa8.02□□□□□ -1.12
SYNE3-205ENST00000557275 TNFRSF1BP20333 461 aa8.02□□□□□ -1.12
SYNE3-205ENST00000557275 OPRK1P41145 380 aa8.02□□□□□ -1.12
SYNE3-205ENST00000557275 SERF2P84101 59 aa8.02□□□□□ -1.12
SYNE3-205ENST00000557275 SIGIRRQ6IA17 410 aa8.02□□□□□ -1.12
SYNE3-205ENST00000557275 VHLLQ6RSH7 139 aa8.02□□□□□ -1.12
SYNE3-205ENST00000557275 CELF2-AS1Q8N7Q2 184 aa8.02□□□□□ -1.12
SYNE3-205ENST00000557275 UFC1Q9Y3C8 167 aa8.02□□□□□ -1.12
SYNE3-205ENST00000557275 GSTZ1O43708 216 aaPredicted RBP8.02□□□□□ -1.12
SYNE3-205ENST00000557275 FUT6P51993 359 aa8.02□□□□□ -1.12
SYNE3-205ENST00000557275 SUCLG1P53597 346 aaKnown RBP8.02□□□□□ -1.12
SYNE3-205ENST00000557275 PNLIPRP2P54317 469 aa8.02□□□□□ -1.12
SYNE3-205ENST00000557275 ERVFRD-1P60508 538 aa8.02□□□□□ -1.12
SYNE3-205ENST00000557275 NANOGP1Q8N7R0 232 aa8.02□□□□□ -1.12
SYNE3-205ENST00000557275 ZNF26P17031 533 aaPredicted RBP8.02□□□□□ -1.13
SYNE3-205ENST00000557275 EVX1P49640 407 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 TWIST1Q15672 202 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 OR2A5Q96R48 311 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 GABARAPL3Q9BY60 117 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 MEIKINA0A087WXM9 373 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 OR2W5A6NFC9 320 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 DNASE2O00115 360 aaPredicted RBP8.02□□□□□ -1.13
SYNE3-205ENST00000557275 C1orf140Q5VVS0 124 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 LAIR1Q6GTX8 287 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 TMEM229BQ8NBD8 167 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 HSD17B8Q92506 261 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 ADAT3Q96EY9 351 aaPredicted RBP8.02□□□□□ -1.13
SYNE3-205ENST00000557275 KNDC1Q76NI1 1749 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 A0A1W2PNV4 684 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 ZNF737O75373 536 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 C6orf132Q5T0Z8 1188 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 OR2G6Q5TZ20 316 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 SMG9Q9H0W8 520 aaKnown RBP8.02□□□□□ -1.13
SYNE3-205ENST00000557275 LPAR3Q9UBY5 353 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 TMEM30CPA0ZSE6 113 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 ZNF840PA6NDX5 716 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 SMAD6O43541 496 aaKnown RBP8.02□□□□□ -1.13
SYNE3-205ENST00000557275 APCDD1Q8J025 514 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 TMEM37Q8WXS4 190 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 DTD2Q96FN9 168 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 IGSF21Q96ID5 467 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 MARCH4Q9P2E8 410 aaPredicted RBP8.02□□□□□ -1.13
SYNE3-205ENST00000557275 TLCD2A6NGC4 264 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 CCR2P41597 374 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 AFMIDQ63HM1 303 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 FAM26EQ8N5C1 309 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 SH3BGRL3Q9H299 93 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 TMED7-TICAM2A0A0A6YYA0 188 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 M0R135 149 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 DSCR3O14972 297 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 HINT1P49773 126 aaPredicted RBP8.02□□□□□ -1.13
SYNE3-205ENST00000557275 PRDX1Q06830 199 aaKnown RBP8.02□□□□□ -1.13
SYNE3-205ENST00000557275 LGALSLQ3ZCW2 172 aaPredicted RBP8.02□□□□□ -1.13
SYNE3-205ENST00000557275 ELFN2Q5R3F8 820 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 TMEM207Q6UWW9 146 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 ZNF799Q96GE5 643 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 TMED7Q9Y3B3 224 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 ST6GAL1P15907 406 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 FHITP49789 147 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 EVX2Q03828 476 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 SYT14P1Q58G82 188 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 ARL6IP6Q8N6S5 226 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 RNF225M0QZC1 329 aaPredicted RBP8.02□□□□□ -1.13
SYNE3-205ENST00000557275 ACKR1Q16570 336 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 TMEM65Q6PI78 240 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 PPP1R3CQ9UQK1 317 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 HCRTR1O43613 425 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 CA2P00918 260 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 EPXP11678 715 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 GAL3ST2Q9H3Q3 398 aa8.02□□□□□ -1.13
SYNE3-205ENST00000557275 ZNF107Q9UII5 783 aaPredicted RBP8.02□□□□□ -1.13
SYNE3-205ENST00000557275 CRYAAP02489 173 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms