RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 PAAF1Q9BRP4 392 aa5.47□□□□□ -1.53
TDP1-215ENST00000556498 CABLES2Q9BTV7 478 aa5.47□□□□□ -1.53
TDP1-215ENST00000556498 TAPBPLQ9BX59 468 aa5.47□□□□□ -1.53
TDP1-215ENST00000556498 KRTAP4-6Q9BYQ5 205 aa5.47□□□□□ -1.53
TDP1-215ENST00000556498 CTDSP1Q9GZU7 261 aa5.47□□□□□ -1.53
TDP1-215ENST00000556498 SIRPDQ9H106 197 aa5.47□□□□□ -1.53
TDP1-215ENST00000556498 BANF2Q9H503 90 aa5.47□□□□□ -1.53
TDP1-215ENST00000556498 PRSS16Q9NQE7 514 aa5.47□□□□□ -1.53
TDP1-215ENST00000556498 EXOSC3Q9NQT5 275 aaKnown RBP5.47□□□□□ -1.53
TDP1-215ENST00000556498 TMEM100Q9NV29 134 aa5.47□□□□□ -1.53
TDP1-215ENST00000556498 BEX4Q9NWD9 120 aaPredicted RBP5.47□□□□□ -1.53
TDP1-215ENST00000556498 CLN6Q9NWW5 311 aa5.47□□□□□ -1.53
TDP1-215ENST00000556498 Q9UFV3 132 aa5.47□□□□□ -1.53
TDP1-215ENST00000556498 SLC45A2Q9UMX9 530 aa5.47□□□□□ -1.53
TDP1-215ENST00000556498 DHDHQ9UQ10 334 aa5.47□□□□□ -1.53
TDP1-215ENST00000556498 CRYBG1Q9Y4K1 1723 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 A0A087X0T9 212 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 KIR2DS1A0A191URI9 304 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 KBTBD11-OT1A0A1B0GTJ5 212 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 KANTRA0A1W2PQU2 76 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 A0A1W2PRS3 328 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 C7orf77A4D0Y5 90 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 TMEM189A5PLL7 270 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 GAGE10A6NGK3 116 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 GGT3PA6NGU5 568 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 FTCDNL1E5RQL4 147 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 NPIPB6E9PJ23 425 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 MPPED1O15442 326 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 ZNF207O43670 478 aaKnown RBP5.46□□□□□ -1.54
TDP1-215ENST00000556498 TMPRSS11DO60235 418 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 EIF4E2O60573 245 aaKnown RBP5.46□□□□□ -1.54
TDP1-215ENST00000556498 HIST1H2BKO60814 126 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 HSBP1O75506 76 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 ABHD16AO95870 558 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 HAND1O96004 215 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 NRASP01111 189 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 HIST1H2BJP06899 126 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 CELA3BP08861 270 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 SLC35G6P0C7Q6 338 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 SMIM10L2AP0DMW4 78 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 SMIM10L2BP0DMW5 78 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 OR12D1P0DN82 309 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 HOXB9P17482 250 aaPredicted RBP5.46□□□□□ -1.54
TDP1-215ENST00000556498 MAOAP21397 527 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 HIST1H2BOP23527 126 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 HTR1DP28221 377 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 ADORA2BP29275 332 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 HIST1H2BBP33778 126 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 THBS3P49746 956 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 ZNF140P52738 457 aaPredicted RBP5.46□□□□□ -1.54
TDP1-215ENST00000556498 HMGCS2P54868 508 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 TIRAPP58753 221 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 HIST1H2BDP58876 126 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 RAB10P61026 200 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 HIST1H2BCP62807 126 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 PAFAH1B2P68402 229 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 SRPXP78539 464 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 NTHL1P78549 312 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 TLE3Q04726 772 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 PLCXD2Q0VAA5 305 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 CTBP1Q13363 440 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 KIR2DS1Q14954 304 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 SNRNP35Q16560 246 aaKnown RBP5.46□□□□□ -1.54
TDP1-215ENST00000556498 HIST2H2BEQ16778 126 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 SLC25A52Q3SY17 297 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 LRRC10Q5BKY1 277 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.46□□□□□ -1.54
TDP1-215ENST00000556498 OTUD3Q5T2D3 398 aaPredicted RBP5.46□□□□□ -1.54
TDP1-215ENST00000556498 MOB1BQ7L9L4 216 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 TMPRSS12Q86WS5 348 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 SLC39A11Q8N1S5 342 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 KLHDC1Q8N7A1 406 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 PLPP5Q8NEB5 264 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 OR1N2Q8NGR9 330 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 MAFAQ8NHW3 353 aaPredicted RBP5.46□□□□□ -1.54
TDP1-215ENST00000556498 LMO3Q8TAP4 145 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 DOK4Q8TEW6 326 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 Q8WTZ3 238 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 PSMF1Q92530 271 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 DCUN1D4Q92564 292 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 HIST1H2BHQ93079 126 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 PNPLA2Q96AD5 504 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 LOXL4Q96JB6 756 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 DNAJC30Q96LL9 226 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 RCHY1Q96PM5 261 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 TSPAN32Q96QS1 320 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 HIST1H2BNQ99877 126 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 HIST1H2BMQ99879 126 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 MACROD1Q9BQ69 325 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 NXF5Q9H1B4 397 aaKnown RBP5.46□□□□□ -1.54
TDP1-215ENST00000556498 OR51I1Q9H343 314 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 ZBTB26Q9HCK0 441 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 DMAC2Q9NW81 257 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 FKBP11Q9NYL4 201 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 KLRF1Q9NZS2 232 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 UQCR10Q9UDW1 63 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 CACFD1Q9UGQ2 172 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 NAT8BQ9UHF3 227 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 KCNE5Q9UJ90 142 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 DAPP1Q9UN19 280 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms