RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 UBTD1Q9HAC8 227 aa4.44□□□□□ -1.7
SRP54-211ENST00000556445 NOX4Q9NPH5 578 aa4.44□□□□□ -1.7
SRP54-211ENST00000556445 FBXO8Q9NRD0 319 aa4.44□□□□□ -1.7
SRP54-211ENST00000556445 FLRT3Q9NZU0 649 aa4.44□□□□□ -1.7
SRP54-211ENST00000556445 CCDC59Q9P031 241 aaKnown RBP4.44□□□□□ -1.7
SRP54-211ENST00000556445 B3GAT1Q9P2W7 334 aa4.44□□□□□ -1.7
SRP54-211ENST00000556445 MBD2Q9UBB5 411 aa4.44□□□□□ -1.7
SRP54-211ENST00000556445 LAMP3Q9UQV4 416 aa4.44□□□□□ -1.7
SRP54-211ENST00000556445 EXOGQ9Y2C4 368 aaKnown RBP4.44□□□□□ -1.7
SRP54-211ENST00000556445 GSTK1Q9Y2Q3 226 aa4.44□□□□□ -1.7
SRP54-211ENST00000556445 CSDC2Q9Y534 153 aaKnown RBP4.44□□□□□ -1.7
SRP54-211ENST00000556445 PPIAL4AQ9Y536 164 aa4.44□□□□□ -1.7
SRP54-211ENST00000556445 NPTNQ9Y639 398 aa4.44□□□□□ -1.7
SRP54-211ENST00000556445 U3KQA8 63 aa4.44□□□□□ -1.7
SRP54-211ENST00000556445 ASXL3Q9C0F0 2248 aa4.44□□□□□ -1.7
SRP54-211ENST00000556445 PPIAL4CA0A0B4J2A2 164 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 LOC390937A0A1W2PQ73 354 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 PLSCR5A0PG75 271 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 VSTM2BA6NLU5 285 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 CLDN25C9JDP6 229 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 D6RAR5 112 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 TEX46H3BTG2 121 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 BHLHE40O14503 412 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 CDC42EP2O14613 210 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 DVL1O14640 695 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 SPINT2O43291 252 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 SYT7O43581 403 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 OR2T1O43869 369 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 TSPAN2O60636 221 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 SCGNO76038 276 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 ZFAND5O76080 213 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 NADKO95544 446 aaPredicted RBP4.43□□□□□ -1.7
SRP54-211ENST00000556445 PTHP01270 115 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 PPIAL4GP0DN37 164 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 IL32P24001 234 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 CXCR1P25024 350 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 FKBP2P26885 142 aaKnown RBP4.43□□□□□ -1.7
SRP54-211ENST00000556445 CCKBRP32239 447 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 TGFBR2P37173 567 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 CD81P60033 236 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 PPIAP62937 165 aaKnown RBP4.43□□□□□ -1.7
SRP54-211ENST00000556445 ACTC1P68032 377 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 ACTA1P68133 377 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 PAX5Q02548 391 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 SKP2Q13309 424 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 SPCS2Q15005 226 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 MOGAT2Q3SYC2 334 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 CLEC12AQ5QGZ9 265 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 GPR157Q5UAW9 335 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 KCNIP4Q6PIL6 250 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 TMEM205Q6UW68 189 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 COX15Q7KZN9 410 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 TGIF2LXQ8IUE1 241 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 C9orf40Q8IXQ3 194 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 GPALPP1Q8IXQ4 340 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 DND1Q8IYX4 353 aaKnown RBP4.43□□□□□ -1.7
SRP54-211ENST00000556445 SLC38A6Q8IZM9 456 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 ACBD7Q8N6N7 88 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 ZNF441Q8N8Z8 693 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 GATSQ8NAP1 163 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 OR5AU1Q8NGC0 362 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 OR8D4Q8NGM9 314 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 OR52I2Q8NH67 350 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 PFN4Q8NHR9 129 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 MARCH1Q8TCQ1 289 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 DYNC2LI1Q8TCX1 351 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.43□□□□□ -1.7
SRP54-211ENST00000556445 UFD1Q92890 307 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 FGF11Q92914 225 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 SLC25A36Q96CQ1 311 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 OMA1Q96E52 524 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 SH3YL1Q96HL8 342 aaPredicted RBP4.43□□□□□ -1.7
SRP54-211ENST00000556445 GPX7Q96SL4 187 aaPredicted RBP4.43□□□□□ -1.7
SRP54-211ENST00000556445 CMKLR1Q99788 373 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 CTRCQ99895 268 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 RHNO1Q9BSD3 238 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 C20orf24Q9BUV8 137 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 NPFFR1Q9GZQ6 430 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 DCSTAMPQ9H295 470 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 NARFLQ9H6Q4 476 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 FKRPQ9H9S5 495 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 MEPEQ9NQ76 525 aaPredicted RBP4.43□□□□□ -1.7
SRP54-211ENST00000556445 NDUFB11Q9NX14 153 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 ZNF229Q9UJW7 825 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 ZNF580Q9UK33 172 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 RPH3ALQ9UNE2 315 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 STUB1Q9UNE7 303 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 MOKQ9UQ07 419 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 NTNG1Q9Y2I2 539 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 LSM2Q9Y333 95 aaKnown RBP4.43□□□□□ -1.7
SRP54-211ENST00000556445 TMED3Q9Y3Q3 217 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 PEX16Q9Y5Y5 336 aa4.43□□□□□ -1.7
SRP54-211ENST00000556445 SDK1Q7Z5N4 2213 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 IGKV2D-30A0A075B6S6 120 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 TRAV36DV7A0A075B6V5 113 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 TRBV11-1A0A0K0K1C0 115 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 DAPL1A0PJW8 107 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 M0R129 80 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 RHODO00212 210 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 KPNA4O00629 521 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms