RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 PLAC9Q5JTB6 97 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 PPP1R3BQ86XI6 285 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 BAP18Q8IXM2 172 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 DEFB123Q8N688 67 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 CSNK2A3Q8NEV1 391 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 GJC3Q8NFK1 279 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 OR5AP2Q8NGF4 316 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 OR5T2Q8NGG2 359 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 OR2I1PQ8NGU4 316 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 RNF141Q8WVD5 230 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 PP6455Q8WZ26 134 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 ZNF837Q96EG3 531 aaPredicted RBP6.17□□□□□ -1.42
TDP1-213ENST00000555880 ARHGAP5-AS1Q96IT6 56 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 C1orf147Q96MC9 270 aaPredicted RBP6.17□□□□□ -1.42
TDP1-213ENST00000555880 RASL10BQ96S79 203 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 IER2Q9BTL4 223 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 ST6GALNAC5Q9BVH7 336 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 ZNF416Q9BWM5 594 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 FN3KRPQ9HA64 309 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 ZNF160Q9HCG1 818 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 PCDHB10Q9UN67 800 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 GPR132Q9UNW8 380 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 C14orf166Q9Y224 244 aaKnown RBP6.17□□□□□ -1.42
TDP1-213ENST00000555880 HRH3Q9Y5N1 445 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 FLVCR1Q9Y5Y0 555 aa6.17□□□□□ -1.42
TDP1-213ENST00000555880 SPTBN5Q9NRC6 3674 aaKnown RBP6.17□□□□□ -1.42
TDP1-213ENST00000555880 A0A0U1RQV5 110 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 SERPINE3A8MV23 424 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 MPTX1A8MV57 137 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 NPIPA2E9PIF3 369 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 F8VVB4 439 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 F8VWA3 439 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 NPIPA3F8WFD2 350 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 EIF1BO60739 113 aaKnown RBP6.16□□□□□ -1.42
TDP1-213ENST00000555880 MTRF1O75570 445 aaKnown RBP6.16□□□□□ -1.42
TDP1-213ENST00000555880 PLATP00750 562 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 ECI1P42126 302 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 PTGFRP43088 359 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 SNU13P55769 128 aaKnown RBP6.16□□□□□ -1.42
TDP1-213ENST00000555880 ZNF169Q14929 603 aaPredicted RBP6.16□□□□□ -1.42
TDP1-213ENST00000555880 PPA1Q15181 289 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 SURF2Q15527 256 aaPredicted RBP6.16□□□□□ -1.42
TDP1-213ENST00000555880 KISS1Q15726 138 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 ZNF239Q16600 458 aaKnown RBP6.16□□□□□ -1.42
TDP1-213ENST00000555880 NKAPLQ5M9Q1 402 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 EIF5AL1Q6IS14 154 aaKnown RBP6.16□□□□□ -1.42
TDP1-213ENST00000555880 PRSS54Q6PEW0 395 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 CLEC18BQ6UXF7 455 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 ZNF574Q6ZN55 896 aaPredicted RBP6.16□□□□□ -1.42
TDP1-213ENST00000555880 SVBPQ8N300 66 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 FADS6Q8N9I5 356 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 CCDC54Q8NEL0 328 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 SLC30A7Q8NEW0 376 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 PAQR8Q8TEZ7 354 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 CLDN23Q96B33 292 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 CPNE2Q96FN4 548 aaPredicted RBP6.16□□□□□ -1.42
TDP1-213ENST00000555880 NECAB3Q96P71 396 aaPredicted RBP6.16□□□□□ -1.42
TDP1-213ENST00000555880 TSNAXQ99598 290 aaKnown RBP6.16□□□□□ -1.42
TDP1-213ENST00000555880 SLC26A1Q9H2B4 701 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 NELFAQ9H3P2 528 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 C5orf66Q9H5L9 145 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 ELL3Q9HB65 397 aaPredicted RBP6.16□□□□□ -1.42
TDP1-213ENST00000555880 PNRC2Q9NPJ4 139 aaKnown RBP6.16□□□□□ -1.42
TDP1-213ENST00000555880 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.16□□□□□ -1.42
TDP1-213ENST00000555880 PCDHB16Q9NRJ7 776 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 EHFQ9NZC4 300 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 NXT1Q9UKK6 140 aaKnown RBP6.16□□□□□ -1.42
TDP1-213ENST00000555880 B3GALT1Q9Y5Z6 326 aa6.16□□□□□ -1.42
TDP1-213ENST00000555880 IGHV5-10-1A0A0J9YXX1 117 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 ZNF814B7Z6K7 855 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 F5H5K5 113 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 FGF16O43320 207 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 RAD51DO75771 328 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 DHRS3O75911 302 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 ATG12O94817 140 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 VAMP5O95183 116 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 HTR3BO95264 441 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 ONECUT2O95948 504 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 FCGR2AP12318 317 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 PRF1P14222 555 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 ZNF17P17021 662 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 CPT2P23786 658 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 CTSSP25774 331 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 BLVRBP30043 206 aaPredicted RBP6.15□□□□□ -1.42
TDP1-213ENST00000555880 ALDH3B1P43353 468 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 DHPSP49366 369 aaPredicted RBP6.15□□□□□ -1.42
TDP1-213ENST00000555880 RGS19P49795 217 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 ZNF84P51523 738 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 ZNF133P52736 654 aaPredicted RBP6.15□□□□□ -1.42
TDP1-213ENST00000555880 PRAMEF20Q5VT98 475 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 ZNF585AQ6P3V2 769 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 GUSBP11Q6P575 273 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 OPN5Q6U736 354 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 TMPPEQ6ZT21 453 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 SPAG16Q8N0X2 631 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 FAM89BQ8N5H3 189 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 WDSUB1Q8N9V3 476 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 BOLLQ8N9W6 283 aaKnown RBP6.15□□□□□ -1.42
TDP1-213ENST00000555880 CLRN3Q8NCR9 226 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 OR52H1Q8NGJ2 320 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms