RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 LOC100130705A0A1B0GUX0 176 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 OOEPA6NGQ2 149 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 METTL15A6NJ78 407 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 J3QLI3 93 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 DLGAP1O14490 977 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 DHRS3O75911 302 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 ATP6V1B1P15313 513 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 FAHP16930 419 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 GATA3P23771 443 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 PEX2P28328 305 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 PITPNBP48739 271 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 ACTC1P68032 377 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 ACTA1P68133 377 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 ZNF91Q05481 1191 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 LRRC36Q1X8D7 754 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 LIPNQ5VXI9 398 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 WDR82Q6UXN9 313 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 NLRC3Q7RTR2 1065 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 KRT74Q7RTS7 529 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 FAM220AQ7Z4H9 259 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 SEMA6DQ8NFY4 1073 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 OR8B3Q8NGG8 313 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 LRRC29Q8WV35 223 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 OR8B2Q96RD0 313 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 ACOXLQ9NUZ1 547 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 OR5V1Q9UGF6 321 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 SLC22A13Q9Y226 551 aa11.46□□□□□ -0.57
SHMT2-219ENST00000555563 POLR3KQ9Y2Y1 108 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-219ENST00000555563 ARHGAP32A7KAX9 2087 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 IGHV3OR15-7A0A075B7D8 119 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 PPIAL4CA0A0B4J2A2 164 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 A0A1B0GTI1 187 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 TMEM210A6NLX4 147 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 TRAPPC2LH3BP13 241 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 J3QRE1 110 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 P2RY10O00398 339 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 CDIPTO14735 213 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 SLC16A6O15403 523 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 SULT1C4O75897 302 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 LHBP01229 141 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 DBTP11182 482 aaKnown RBP11.45□□□□□ -0.58
SHMT2-219ENST00000555563 ADRA2CP18825 462 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 CPT2P23786 658 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 PSMB10P40306 273 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 GPM6AP51674 278 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 ISL1P61371 349 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 GNB2P62879 340 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 RIPPLY1Q0D2K3 151 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 ODF4Q2M2E3 257 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 TP53I3Q53FA7 332 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 CEP78Q5JTW2 689 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 ZBTB37Q5TC79 503 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 LPCAT4Q643R3 524 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 KCTD8Q6ZWB6 473 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 THAP5Q7Z6K1 395 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 CATSPERDQ86XM0 798 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 FAM90A1Q86YD7 464 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 RORBQ92753 470 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 RPL3LQ92901 407 aaKnown RBP11.45□□□□□ -0.58
SHMT2-219ENST00000555563 ITFG2Q969R8 447 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 RNF170Q96K19 258 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 RDH12Q96NR8 316 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 C7orf69Q9H7B7 122 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 RNPEPL1Q9HAU8 725 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 CTSZQ9UBR2 303 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 OPN4Q9UHM6 478 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 GNG8Q9UK08 70 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 PIGLQ9Y2B2 252 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 V9GYS6 101 aa11.45□□□□□ -0.58
SHMT2-219ENST00000555563 TRAV38-1A0A0B4J264 116 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 SNTNA6NMZ2 147 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 SRRM5B3KS81 715 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-219ENST00000555563 MPZL2O60487 215 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 MTRF1O75570 445 aaKnown RBP11.44□□□□□ -0.58
SHMT2-219ENST00000555563 ZNF12P17014 697 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 CCL1P22362 96 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 KCNJ8Q15842 424 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 DMRTC1Q5HYR2 192 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 WDR38Q5JTN6 314 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 TEX36Q5VZQ5 186 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 PLCXD3Q63HM9 321 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 C1QL2Q7Z5L3 287 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 ZNF555Q8NEP9 628 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 RHOXF1Q8NHV9 184 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 APH1BQ8WW43 257 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 LGALS12Q96DT0 336 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 TRIM36Q9NQ86 728 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 CLN8Q9UBY8 286 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 ENPP5Q9UJA9 477 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 INSIG2Q9Y5U4 225 aa11.44□□□□□ -0.58
SHMT2-219ENST00000555563 DAPL1A0PJW8 107 aa11.43□□□□□ -0.58
SHMT2-219ENST00000555563 OR5B21A6NL26 309 aa11.43□□□□□ -0.58
SHMT2-219ENST00000555563 H3BSH0 61 aa11.43□□□□□ -0.58
SHMT2-219ENST00000555563 ADAM20O43506 726 aa11.43□□□□□ -0.58
SHMT2-219ENST00000555563 GYPAP02724 150 aa11.43□□□□□ -0.58
SHMT2-219ENST00000555563 CFHR2P36980 270 aa11.43□□□□□ -0.58
SHMT2-219ENST00000555563 KIR3DL2P43630 455 aa11.43□□□□□ -0.58
SHMT2-219ENST00000555563 GNG3P63215 75 aa11.43□□□□□ -0.58
SHMT2-219ENST00000555563 PAX2Q02962 417 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms