RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 MRPS34P82930 218 aaKnown RBP8.54□□□□□ -1.04
PSEN1-213ENST00000555386 ROM1Q03395 351 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 MAB21L1Q13394 359 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 NCMAPQ5T1S8 102 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 SLC18B1Q6NT16 456 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 CORO6Q6QEF8 472 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 VHLLQ6RSH7 139 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 ZNF704Q6ZNC4 412 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-213ENST00000555386 LINC00346Q8IVM7 164 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 CMTM4Q8IZR5 234 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 ASCC1Q8N9N2 400 aaKnown RBP8.54□□□□□ -1.04
PSEN1-213ENST00000555386 OR10H5Q8NGA6 315 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 OR2G2Q8NGZ5 317 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 GPR148Q8TDV2 347 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 C11orf40Q8WZ69 217 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 FBXO17Q96EF6 278 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 S100A16Q96FQ6 103 aaKnown RBP8.54□□□□□ -1.04
PSEN1-213ENST00000555386 OR8B4Q96RC9 309 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 GFI1Q99684 422 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 ZNF416Q9BWM5 594 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 OR51B6Q9H340 312 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 LIME1Q9H400 295 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 OBP2BQ9NPH6 170 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 IKZF2Q9UKS7 526 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 KLHDC2Q9Y2U9 406 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 IGLV1-36A0A0B4J1U3 117 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 ACOD1A6NK06 481 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 CYSRT1A8MQ03 144 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 ATP6V1G2-DDX39BF2Z307 99 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 GABARAPH6UMI1 98 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 RPP14O95059 124 aaKnown RBP8.53□□□□□ -1.04
PSEN1-213ENST00000555386 TCRBP04435 133 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 CBR1P16152 277 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 LOXP28300 417 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-213ENST00000555386 ARR3P36575 388 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 RPS27P42677 84 aaKnown RBP8.53□□□□□ -1.04
PSEN1-213ENST00000555386 GZMKP49863 264 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 DGCR2P98153 550 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 CD83Q01151 205 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 TNK1Q13470 666 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 KLF9Q13886 244 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-213ENST00000555386 ENDOGQ14249 297 aaKnown RBP8.53□□□□□ -1.04
PSEN1-213ENST00000555386 PABPC1L2AQ5JQF8 200 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 TEX30Q5JUR7 227 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 ZNF774Q6NX45 483 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 KCTD18Q6PI47 426 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-213ENST00000555386 BTN2A1Q7KYR7 527 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 KRT74Q7RTS7 529 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 DPY19L4Q7Z388 723 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 SYT9Q86SS6 491 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 LRRTM1Q86UE6 522 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 GLCCI1Q86VQ1 547 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 ZNF679Q8IYX0 411 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 ZFAND1Q8TCF1 268 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 HAVCR1Q96D42 359 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 C4orf45Q96LM5 186 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 DMRTB1Q96MA1 342 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 FYTTD1Q96QD9 318 aaKnown RBP8.53□□□□□ -1.04
PSEN1-213ENST00000555386 GON7Q9BXV9 100 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 LIN7BQ9HAP6 207 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 B3GNT2Q9NY97 397 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 PTTG3PQ9NZH4 202 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 ASH2LQ9UBL3 628 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 NAV2Q8IVL1 2488 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 CCDC168Q8NDH2 2452 aa8.53□□□□□ -1.04
PSEN1-213ENST00000555386 MAP1AP78559 2803 aaPredicted RBP8.52□□□□□ -1.04
PSEN1-213ENST00000555386 A0A0B4J203 849 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 A8MV72 311 aaPredicted RBP8.52□□□□□ -1.05
PSEN1-213ENST00000555386 CRYAAP02489 173 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 CST2P09228 141 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 CD3GP09693 182 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 ZNF823P16415 610 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 PTAFRP25105 342 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 CALCRP30988 508 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 ART1P52961 327 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 PSG4Q00888 419 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 NAAAQ02083 359 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 GLO1Q04760 184 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 PLP2Q04941 152 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 SNTB2Q13425 540 aaKnown RBP8.52□□□□□ -1.05
PSEN1-213ENST00000555386 CCDC92Q53HC0 331 aaPredicted RBP8.52□□□□□ -1.05
PSEN1-213ENST00000555386 ELFN2Q5R3F8 820 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 HES5Q5TA89 166 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 FAM27BQ5VT28 67 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 CD276Q5ZPR3 534 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 ZNF627Q7L945 461 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 CCDC36Q8IYA8 594 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 ZNF676Q8N7Q3 588 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 OR56B4Q8NH76 319 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 GRPEL2Q8TAA5 225 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 THEM6Q8WUY1 208 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 SLC25A38Q96DW6 304 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 CACNG6Q9BXT2 260 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 MED28Q9H204 178 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 GHITMQ9H3K2 345 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 MCUBQ9NWR8 336 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 PLEKHA6Q9Y2H5 1048 aa8.52□□□□□ -1.05
PSEN1-213ENST00000555386 RBMX2Q9Y388 322 aaKnown RBP8.52□□□□□ -1.05
PSEN1-213ENST00000555386 A0A0A6YYJ9 748 aa8.51□□□□□ -1.05
PSEN1-213ENST00000555386 FAM221AA4D161 298 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms