RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 RDH12Q96NR8 316 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 NUDT9Q9BW91 350 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 HINT2Q9BX68 163 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 MAP1LC3CQ9BXW4 147 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 TM6SF2Q9BZW4 377 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 ANKHQ9HCJ1 492 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 LZTFL1Q9NQ48 299 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 CYTL1Q9NRR1 136 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 VAX2Q9UIW0 290 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 GGA2Q9UJY4 613 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 SIGLEC9Q9Y336 463 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 PPIL1Q9Y3C6 166 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 YEATS2Q9ULM3 1422 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 C2orf16Q68DN1 1984 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 TRAV8-7A0A075B6U6 113 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 IGHV7-4-1A0A0J9YVY3 117 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 A0A0J9YYE9 177 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 NDUFS8O00217 210 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 ENSAO43768 121 aaKnown RBP1.81□□□□□ -2.12
SCFD1-213ENST00000554776 CCDC22O60826 627 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 WISP3O95389 354 aaPredicted RBP1.81□□□□□ -2.12
SCFD1-213ENST00000554776 PAHP00439 452 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 PTHP01270 115 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 IGLV2-8P01709 118 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 IGHV3-11P01762 117 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 TRBC1P01850 177 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 S100A9P06702 114 aaKnown RBP1.81□□□□□ -2.12
SCFD1-213ENST00000554776 TPM1P09493 284 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 LIPCP11150 499 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 PRKACBP22694 351 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 GNRHRP30968 328 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 DEKP35659 375 aaKnown RBP1.81□□□□□ -2.12
SCFD1-213ENST00000554776 PSMC5P62195 406 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 RPL31P62899 125 aaKnown RBP1.81□□□□□ -2.12
SCFD1-213ENST00000554776 IFITM3Q01628 133 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 ST3GAL4Q11206 333 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 NAB1Q13506 487 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 STK38Q15208 465 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 TEX30Q5JUR7 227 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 STEAP4Q687X5 459 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 ZNF880Q6PDB4 577 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 C16orf87Q6PH81 154 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 FAM58AQ8N1B3 248 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 OR4M1Q8NGD0 313 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 OR13C9Q8NGT0 318 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 OR6K6Q8NGW6 343 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 OR13G1Q8NGZ3 307 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 SLC25A46Q96AG3 418 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 TEAD3Q99594 435 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 NAPGQ99747 312 aaPredicted RBP1.81□□□□□ -2.12
SCFD1-213ENST00000554776 TBL1YQ9BQ87 522 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 C20orf144Q9BQM9 153 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 MARVELD1Q9BSK0 173 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 PORCNQ9H237 461 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 OR51B5Q9H339 312 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 C1orf198Q9H425 327 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 HEBP1Q9NRV9 189 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 TREX1Q9NSU2 369 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 RHBDL2Q9NX52 303 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 C21orf62Q9NYP8 219 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 ENOPH1Q9UHY7 261 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 STK38LQ9Y2H1 464 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 V9GYY9 64 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 SBNO1A3KN83 1393 aa1.81□□□□□ -2.12
SCFD1-213ENST00000554776 TUBGCP6Q96RT7 1819 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 IGLV4-60A0A075B6I1 120 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 IGHV3-49A0A0A0MS15 119 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 IGHV2OR16-5A0A0B4J2B6 119 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 CCL15-CCL14A0A0B4J2E2 113 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 TMEM150BA6NC51 233 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 LRCOL1A6NCL2 159 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 GOLGA8JA6NMD2 632 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 J3QT63 122 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 SC5DO75845 299 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 TTC4O95801 387 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 RPN2P04844 631 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 GOLGA8HP0CJ92 632 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 CD28P10747 220 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 HSPD1P10809 573 aaKnown RBP1.8□□□□□ -2.12
SCFD1-213ENST00000554776 CXCR1P25024 350 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 PAX6P26367 422 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 TGFBR1P36897 503 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 PRLHRP49683 370 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 ETV1P50549 477 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 MLF1P58340 268 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 MTPNP58546 118 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 TAL2Q16559 108 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 CCL15Q16663 113 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 COX19Q49B96 90 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 C5orf47Q569G3 176 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 YIF1BQ5BJH7 314 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 FAM27D1Q5T7N8 215 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 AADACL4Q5VUY2 407 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 AP1ARQ63HQ0 302 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 PP632Q6XCG6 107 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 TMPRSS11AQ6ZMR5 421 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 ZCCHC24Q8N2G6 241 aaKnown RBP1.8□□□□□ -2.12
SCFD1-213ENST00000554776 OSR2Q8N2R0 312 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 OR4D6Q8NGJ1 314 aa1.8□□□□□ -2.12
SCFD1-213ENST00000554776 ALS2CR12Q96Q35 445 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms