RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 SPSB1Q96BD6 273 aa10.08□□□□□ -0.8
NEK9-202ENST00000553823 PLPPR2Q96GM1 343 aa10.08□□□□□ -0.8
NEK9-202ENST00000553823 C6orf62Q9GZU0 229 aaPredicted RBP10.08□□□□□ -0.8
NEK9-202ENST00000553823 PLGRKTQ9HBL7 147 aa10.08□□□□□ -0.8
NEK9-202ENST00000553823 SMURF1Q9HCE7 757 aa10.08□□□□□ -0.8
NEK9-202ENST00000553823 MRPL15Q9P015 296 aaKnown RBP10.08□□□□□ -0.8
NEK9-202ENST00000553823 CGGBP1Q9UFW8 167 aaPredicted RBP10.08□□□□□ -0.8
NEK9-202ENST00000553823 PURGQ9UJV8 347 aaKnown RBP10.08□□□□□ -0.8
NEK9-202ENST00000553823 FZR1Q9UM11 496 aa10.08□□□□□ -0.8
NEK9-202ENST00000553823 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.07□□□□□ -0.8
NEK9-202ENST00000553823 SLC17A2O00624 439 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 LILRA1O75019 489 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 CD3EP07766 207 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 ZNF250P15622 560 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 CFPP27918 469 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 THBS2P35442 1172 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 ZNF93P35789 620 aaPredicted RBP10.07□□□□□ -0.8
NEK9-202ENST00000553823 BMXP51813 675 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 PRDX4Q13162 271 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 DYNC1I2Q13409 638 aaKnown RBP10.07□□□□□ -0.8
NEK9-202ENST00000553823 RAB11BQ15907 218 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 ALKBH6Q3KRA9 238 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 DMRTC1Q5HYR2 192 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 C1orf100Q5SVJ3 147 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 MZT2AQ6P582 158 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 VHLLQ6RSH7 139 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 LYPD6Q86Y78 171 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 ZDHHC23Q8IYP9 409 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 OR6M1Q8NGM8 313 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 ZNF671Q8TAW3 534 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 SYNPRQ8TBG9 265 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 NPRL2Q8WTW4 380 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 TMEM171Q8WVE6 324 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 ZDHHC16Q969W1 377 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 SORCS2Q96PQ0 1159 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 TSC22D3Q99576 134 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 UQCC2Q9BRT2 126 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 MRI1Q9BV20 369 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 METTL17Q9H7H0 456 aaPredicted RBP10.07□□□□□ -0.8
NEK9-202ENST00000553823 PPP1R3EQ9H7J1 279 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 CRIM1Q9NZV1 1036 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 ABRACLQ9P1F3 81 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 STEAP1Q9UHE8 339 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 GPR160Q9UJ42 338 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 RALYQ9UKM9 306 aaKnown RBP10.07□□□□□ -0.8
NEK9-202ENST00000553823 SLC7A11Q9UPY5 501 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 MPC1Q9Y5U8 109 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 ATP23Q9Y6H3 246 aa10.07□□□□□ -0.8
NEK9-202ENST00000553823 WIPF3A6NGB9 483 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 PYCARD-AS1I3L0S3 204 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 CTDSP2O14595 271 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 TIMM8AO60220 97 aaPredicted RBP10.06□□□□□ -0.8
NEK9-202ENST00000553823 HTR2CP28335 458 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 KIR2DL3P43628 341 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 FUT6P51993 359 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 KLF3P57682 345 aaPredicted RBP10.06□□□□□ -0.8
NEK9-202ENST00000553823 SELENOVP59797 346 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 LSAMPQ13449 338 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 RIN1Q13671 783 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 KISS1Q15726 138 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 MSMPQ1L6U9 139 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 TMEM255AQ5JRV8 349 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 FAM166AQ6J272 317 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 ADAM5Q6NVV9 412 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 LINC00299Q6ZSB3 139 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 LHFPL2Q6ZUX7 228 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 OR8G5Q8NG78 346 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 OR6Q1Q8NGQ2 317 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 TRMT10AQ8TBZ6 339 aaKnown RBP10.06□□□□□ -0.8
NEK9-202ENST00000553823 TBC1D15Q8TC07 691 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 SSC4DQ8WTU2 575 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 BORCS8Q96FH0 119 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 CPNE2Q96FN4 548 aaPredicted RBP10.06□□□□□ -0.8
NEK9-202ENST00000553823 SPACA5Q96QH8 159 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 HIST1H2AAQ96QV6 131 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 GPER1Q99527 375 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 NKX3-1Q99801 234 aaPredicted RBP10.06□□□□□ -0.8
NEK9-202ENST00000553823 ZNF442Q9H7R0 627 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 CNTD2Q9H8S5 307 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 ABCB9Q9NP78 766 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 CA10Q9NS85 328 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 COMMD3Q9UBI1 195 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 POU2F3Q9UKI9 436 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 CMAHPQ9Y471 501 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 PEX16Q9Y5Y5 336 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 ARFGEF3Q5TH69 2177 aa10.06□□□□□ -0.8
NEK9-202ENST00000553823 LRRK2Q5S007 2527 aa10.05□□□□□ -0.8
NEK9-202ENST00000553823 IGLV3-9A0A075B6K5 115 aa10.05□□□□□ -0.8
NEK9-202ENST00000553823 A0A0B4J203 849 aa10.05□□□□□ -0.8
NEK9-202ENST00000553823 FAM230AA0A1W2PPH8 454 aa10.05□□□□□ -0.8
NEK9-202ENST00000553823 VSTM5A8MXK1 200 aa10.05□□□□□ -0.8
NEK9-202ENST00000553823 SHISA9B4DS77 424 aa10.05□□□□□ -0.8
NEK9-202ENST00000553823 RGS5O15539 181 aa10.05□□□□□ -0.8
NEK9-202ENST00000553823 SIAH2O43255 324 aa10.05□□□□□ -0.8
NEK9-202ENST00000553823 PAHP00439 452 aa10.05□□□□□ -0.8
NEK9-202ENST00000553823 IGHV3-13P01766 116 aa10.05□□□□□ -0.8
NEK9-202ENST00000553823 CALCBP10092 127 aa10.05□□□□□ -0.8
NEK9-202ENST00000553823 SNRPBP14678 240 aaKnown RBP10.05□□□□□ -0.8
NEK9-202ENST00000553823 CA6P23280 308 aa10.05□□□□□ -0.8
NEK9-202ENST00000553823 S100A5P33763 92 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms