RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 C1orf94Q6P1W5 598 aa3.91□□□□□ -1.78
CPSF6-206ENST00000550987 CNIH2Q6PI25 160 aa3.91□□□□□ -1.78
CPSF6-206ENST00000550987 SLC25A48Q6ZT89 311 aaKnown RBP3.91□□□□□ -1.78
CPSF6-206ENST00000550987 DCXRQ7Z4W1 244 aa3.91□□□□□ -1.78
CPSF6-206ENST00000550987 CDC20BQ86Y33 519 aa3.91□□□□□ -1.78
CPSF6-206ENST00000550987 OR51S1Q8NGJ8 323 aa3.91□□□□□ -1.78
CPSF6-206ENST00000550987 RHEBL1Q8TAI7 183 aa3.91□□□□□ -1.78
CPSF6-206ENST00000550987 ZNF317Q96PQ6 595 aaPredicted RBP3.91□□□□□ -1.78
CPSF6-206ENST00000550987 KCTD14Q9BQ13 255 aaPredicted RBP3.91□□□□□ -1.78
CPSF6-206ENST00000550987 SAV1Q9H4B6 383 aaPredicted RBP3.91□□□□□ -1.78
CPSF6-206ENST00000550987 MRM3Q9HC36 420 aaKnown RBP3.91□□□□□ -1.78
CPSF6-206ENST00000550987 SH2D2AQ9NP31 389 aa3.91□□□□□ -1.78
CPSF6-206ENST00000550987 EXD2Q9NVH0 621 aa3.91□□□□□ -1.78
CPSF6-206ENST00000550987 LYARQ9NX58 379 aaKnown RBP3.91□□□□□ -1.78
CPSF6-206ENST00000550987 IL37Q9NZH6 218 aa3.91□□□□□ -1.78
CPSF6-206ENST00000550987 MOKQ9UQ07 419 aa3.91□□□□□ -1.78
CPSF6-206ENST00000550987 PPIL1Q9Y3C6 166 aa3.91□□□□□ -1.78
CPSF6-206ENST00000550987 KLF18A0A0U1RQI7 1052 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 A0A1B0GUH1 482 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 TRPC5OSA6NMA1 111 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 TEX46H3BTG2 121 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 EIF3HO15372 352 aaKnown RBP eCLIP3.9□□□□□ -1.792e-6■□□□□ 9.4
CPSF6-206ENST00000550987 OR2F2O95006 317 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 RPP14O95059 124 aaKnown RBP3.9□□□□□ -1.79
CPSF6-206ENST00000550987 CCNB2O95067 398 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 IGHV3-48P01763 117 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 IGHV2-5P01817 119 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 HSPB1P04792 205 aaKnown RBP3.9□□□□□ -1.79
CPSF6-206ENST00000550987 ZNF43P17038 809 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 GSTM3P21266 225 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 GABRR1P24046 479 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 FOXN2P32314 431 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 CBX5P45973 191 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 KCNJ3P48549 501 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 CX3CR1P49238 355 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 UGT2B15P54855 530 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 GPX6P59796 221 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 RAB10P61026 200 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 RAB11AP62491 216 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 TNNC1P63316 161 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 VAMP3Q15836 100 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 RAB11BQ15907 218 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 XKR4Q5GH76 650 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 REEP3Q6NUK4 255 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 SNX20Q7Z614 316 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 TMEM150AQ86TG1 271 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 AKAP14Q86UN6 197 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 MMAAQ8IVH4 418 aaKnown RBP3.9□□□□□ -1.79
CPSF6-206ENST00000550987 LRRC34Q8IZ02 419 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 C6orf223Q8N319 242 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 C17orf78Q8N4C9 275 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 GATSQ8NAP1 163 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 OR7G1Q8NGA0 311 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 OR13C9Q8NGT0 318 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 OR9G1Q8NH87 305 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 UBA3Q8TBC4 463 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 ZNF596Q8TC21 504 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 SLC7A13Q8TCU3 470 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 DTX3LQ8TDB6 740 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 CAPSLQ8WWF8 208 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 MAGEB18Q96M61 343 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 RARRES2Q99969 163 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 ANKRD60Q9BZ19 345 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 ROGDIQ9GZN7 287 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 OR51V1Q9H2C8 321 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 GAL3ST2Q9H3Q3 398 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 SLC25A22Q9H936 323 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 SIAEQ9HAT2 523 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 ZDHHC4Q9NPG8 344 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 STOX2Q9P2F5 926 aaPredicted RBP3.9□□□□□ -1.79
CPSF6-206ENST00000550987 VSIG4Q9Y279 399 aa3.9□□□□□ -1.79
CPSF6-206ENST00000550987 OR5K4A6NMS3 321 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 BCL2L11O43521 198 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 HUS1O60921 280 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 ZNF780AO75290 641 aaPredicted RBP3.89□□□□□ -1.79
CPSF6-206ENST00000550987 LYPLA2O95372 231 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 LCA5LO95447 670 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 KCNE1P15382 129 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 HMGA1P17096 107 aaKnown RBP3.89□□□□□ -1.79
CPSF6-206ENST00000550987 ATF6P18850 670 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 NSG1P42857 185 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 SLC1A1P43005 524 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 TFPI2P48307 235 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 TUFMP49411 452 aaKnown RBP3.89□□□□□ -1.79
CPSF6-206ENST00000550987 TAS2R19P59542 299 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 PRPS1P60891 318 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 SKP1P63208 163 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 EGFEM1PQ0D2K5 195 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 RCAN2Q14206 197 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 C1orf100Q5SVJ3 147 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 THOC7Q6I9Y2 204 aaKnown RBP3.89□□□□□ -1.79
CPSF6-206ENST00000550987 ZNF620Q6ZNG0 422 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 SCD5Q86SK9 330 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 ZBTB8OSQ8IWT0 167 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 PIANPQ8IYJ0 282 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 PUSL1Q8N0Z8 303 aaKnown RBP3.89□□□□□ -1.79
CPSF6-206ENST00000550987 FBXL16Q8N461 479 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 MS4A15Q8N5U1 240 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 FBXL13Q8NEE6 735 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 OR1S2Q8NGQ3 325 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms