RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 C1QTNF5Q9BXJ0 243 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 C7orf69Q9H7B7 122 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 ACOT13Q9NPJ3 140 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 ACOXLQ9NUZ1 547 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 FAM206AQ9NX38 181 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 BABAM2Q9NXR7 383 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 GNG8Q9UK08 70 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 ZDHHC8Q9ULC8 765 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 SNX5Q9Y5X3 404 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 NPTNQ9Y639 398 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 R4GMQ9 66 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 MAGEA13PA6NCF6 341 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 J3QW42 95 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 MYL12BO14950 172 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 CD55P08174 381 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 SMIM18P0DKX4 95 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 TNFSF4P23510 183 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 HSD11B1P28845 292 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 TGM4P49221 684 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 CX3CR1P49238 355 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 RGS6P49758 472 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 ZNF121P58317 390 aaPredicted RBP11.3□□□□□ -0.6
NUP188-211ENST00000550219 SPHARQ15513 63 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 ZNF829Q3KNS6 432 aaPredicted RBP11.3□□□□□ -0.6
NUP188-211ENST00000550219 NAA40Q86UY6 237 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 C1orf174Q8IYL3 243 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 OR5AS1Q8N127 324 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 ZNF283Q8N7M2 679 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 NANPQ8TBE9 248 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 RPS4Y2Q8TD47 263 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 GATAD2BQ8WXI9 593 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 OR5M11Q96RB7 305 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 ISYNA1Q9NPH2 558 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 TMEM106BQ9NUM4 274 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 TBCCD1Q9NVR7 557 aa11.3□□□□□ -0.6
NUP188-211ENST00000550219 PURGQ9UJV8 347 aaKnown RBP11.3□□□□□ -0.6
NUP188-211ENST00000550219 TMEM269A0A1B0GVZ9 245 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 E9PI62 339 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 OGG1O15527 345 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 FOXH1O75593 365 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 LALBAP00709 142 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 IGHV2-70P01814 119 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 ADH4P08319 380 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 CCR9P51686 369 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 GBX2P52951 348 aaPredicted RBP11.29□□□□□ -0.6
NUP188-211ENST00000550219 NANOS3P60323 173 aaKnown RBP11.29□□□□□ -0.6
NUP188-211ENST00000550219 BDH1Q02338 343 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 MFGE8Q08431 387 aaPredicted RBP11.29□□□□□ -0.6
NUP188-211ENST00000550219 CCDC58Q4VC31 144 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 UBE2UQ5VVX9 321 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 XAF1Q6GPH4 301 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 CATSPERDQ86XM0 798 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 KLBQ86Z14 1044 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 C3orf56Q8N813 242 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 OR2G2Q8NGZ5 317 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 ITLN1Q8WWA0 313 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 CMBLQ96DG6 245 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 MOB1AQ9H8S9 216 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 SP140LQ9H930 580 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 PTTG3PQ9NZH4 202 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 ZNF319Q9P2F9 582 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 NUFIP1Q9UHK0 495 aaKnown RBP11.29□□□□□ -0.6
NUP188-211ENST00000550219 PPIAL4AQ9Y536 164 aa11.29□□□□□ -0.6
NUP188-211ENST00000550219 RPP14O95059 124 aaKnown RBP11.28□□□□□ -0.6
NUP188-211ENST00000550219 TNFRSF1AP19438 455 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 ANOS1P23352 680 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 GATA3P23771 443 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 ZFP36P26651 326 aaKnown RBP11.28□□□□□ -0.6
NUP188-211ENST00000550219 PSMB10P40306 273 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 TAS2R43P59537 309 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 SEC61A1P61619 476 aaKnown RBP11.28□□□□□ -0.6
NUP188-211ENST00000550219 ARMCX4Q5H9R4 360 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 RPL22L1Q6P5R6 122 aaKnown RBP11.28□□□□□ -0.6
NUP188-211ENST00000550219 Q6ZR03 302 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 USP43Q70EL4 1123 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 ZNF367Q7RTV3 350 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 PRSS35Q8N3Z0 413 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 SPICQ8N5J4 248 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 OR10AD1Q8NGE0 317 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 OR52H1Q8NGJ2 320 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 FAM216AQ8WUB2 273 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 FCGR1BQ92637 280 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 APOBEC3DQ96AK3 386 aaPredicted RBP11.28□□□□□ -0.6
NUP188-211ENST00000550219 COG8Q96MW5 612 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 OR2V2Q96R30 315 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 PBOV1Q9GZY1 135 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 ESM1Q9NQ30 184 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 TRIM36Q9NQ86 728 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 FRRS1LQ9P0K9 344 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 OPN4Q9UHM6 478 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 OR52A1Q9UKL2 312 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 STARD10Q9Y365 291 aa11.28□□□□□ -0.6
NUP188-211ENST00000550219 SIRT4Q9Y6E7 314 aaPredicted RBP11.28□□□□□ -0.6
NUP188-211ENST00000550219 C5orf63A6NC05 138 aa11.27□□□□□ -0.61
NUP188-211ENST00000550219 OR4C45A6NMZ5 311 aa11.27□□□□□ -0.61
NUP188-211ENST00000550219 LOC110117498-PIK3R3F6TDL0 507 aa11.27□□□□□ -0.61
NUP188-211ENST00000550219 IGLV3-1P01715 115 aa11.27□□□□□ -0.61
NUP188-211ENST00000550219 LCATP04180 440 aa11.27□□□□□ -0.61
NUP188-211ENST00000550219 CD1AP06126 327 aa11.27□□□□□ -0.61
NUP188-211ENST00000550219 RPSAP08865 295 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms