RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 HNRNPA0Q13151 305 aaKnown RBP11.59□□□□□ -0.55
PTCH1-217ENST00000548420 LCN1P1Q5VSP4 162 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 LRRC28Q86X40 367 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-217ENST00000548420 SPRYD4Q8WW59 207 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-217ENST00000548420 RAB3IPQ96QF0 476 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-217ENST00000548420 IL4I1Q96RQ9 567 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 B9D2Q9BPU9 175 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 S100A14Q9HCY8 104 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 MRPL15Q9P015 296 aaKnown RBP11.59□□□□□ -0.55
PTCH1-217ENST00000548420 LAMP5Q9UJQ1 280 aa11.59□□□□□ -0.55
PTCH1-217ENST00000548420 ACOD1A6NK06 481 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 PRR32B1ATL7 298 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 GPR37O15354 613 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 MMP16P51512 607 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 ALDH3A2P51648 485 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 RAD23AP54725 363 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 KCTD18Q6PI47 426 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-217ENST00000548420 LRRN1Q6UXK5 716 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 Q6YL49 198 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 Q6ZSV7 163 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 KRT74Q7RTS7 529 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 KLBQ86Z14 1044 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 PLPP7Q8NBV4 271 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 OR8J1Q8NGP2 316 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 Q8TCH9 128 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 TRUB1Q8WWH5 349 aaKnown RBP11.58□□□□□ -0.56
PTCH1-217ENST00000548420 ERGIC1Q969X5 290 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 HRASLS5Q96KN8 279 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 ADGRL4Q9HBW9 690 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 H2AFY2Q9P0M6 372 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-217ENST00000548420 COPS3Q9UNS2 423 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 NOP16Q9Y3C1 178 aaKnown RBP11.58□□□□□ -0.56
PTCH1-217ENST00000548420 LRP12Q9Y561 859 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 TMEM14AQ9Y6G1 99 aa11.58□□□□□ -0.56
PTCH1-217ENST00000548420 hCG_38984A0A1B0GV85 526 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 GGT3PA6NGU5 568 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 EI24O14681 340 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 ZNF254O75437 659 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 ANXA2P07355 339 aaKnown RBP11.57□□□□□ -0.56
PTCH1-217ENST00000548420 CA6P23280 308 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 CFL1P23528 166 aaKnown RBP11.57□□□□□ -0.56
PTCH1-217ENST00000548420 CD80P33681 288 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 PSMA6P60900 246 aaKnown RBP11.57□□□□□ -0.56
PTCH1-217ENST00000548420 TMEM155Q4W5P6 130 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 SLC25A30Q5SVS4 291 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 FAM57BQ71RH2 274 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-217ENST00000548420 GID4Q8IVV7 300 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 ZNF679Q8IYX0 411 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 OR56B2PQ8NGI1 322 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 ASB17Q8WXJ9 295 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 ITFG2Q969R8 447 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 ZDHHC16Q969W1 377 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 REEP6Q96HR9 211 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 OR8B4Q96RC9 309 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 CNN2Q99439 309 aaKnown RBP11.57□□□□□ -0.56
PTCH1-217ENST00000548420 MNTQ99583 582 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 OR10A2Q9H208 303 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 RIBC2Q9H4K1 309 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 RGCCQ9H4X1 137 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 DNAJC27Q9NZQ0 273 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 WARS2Q9UGM6 360 aaKnown RBP11.57□□□□□ -0.56
PTCH1-217ENST00000548420 POLR3KQ9Y2Y1 108 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-217ENST00000548420 N6AMT1Q9Y5N5 214 aa11.57□□□□□ -0.56
PTCH1-217ENST00000548420 TBX1O43435 398 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 FOXH1O75593 365 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 MRPL3P09001 348 aaKnown RBP11.56□□□□□ -0.56
PTCH1-217ENST00000548420 SBK2P0C263 348 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 HTR1FP30939 366 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 GSK3AP49840 483 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 SEC61A1P61619 476 aaKnown RBP11.56□□□□□ -0.56
PTCH1-217ENST00000548420 BTG1P62324 171 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 PAX8Q06710 450 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 TMED1Q13445 227 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 ZMYND11Q15326 602 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 OR8G1Q15617 311 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 OR8B8Q15620 311 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 TIGD6Q17RP2 521 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 BRD3OSQ6XYD6 125 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 KRT77Q7Z794 578 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 MOGAT3Q86VF5 341 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 PQLC1Q8N2U9 271 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 CBR4Q8N4T8 237 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 SPERTQ8NA61 448 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 ZNF420Q8TAQ5 688 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-217ENST00000548420 PGAM5Q96HS1 289 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 LYZL4Q96KX0 146 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 TBX15Q96SF7 602 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 SLC29A1Q99808 456 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 GAL3ST1Q99999 423 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 OCSTAMPQ9BR26 566 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 CLN6Q9NWW5 311 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 FAM206AQ9NX38 181 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 ZNF391Q9UJN7 358 aa11.56□□□□□ -0.56
PTCH1-217ENST00000548420 A0A0U1RQV5 110 aa11.55□□□□□ -0.56
PTCH1-217ENST00000548420 F5H0A9 414 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-217ENST00000548420 GPR137BO60478 399 aa11.55□□□□□ -0.56
PTCH1-217ENST00000548420 SRSF10O75494 262 aaKnown RBP11.55□□□□□ -0.56
PTCH1-217ENST00000548420 IGLV3-1P01715 115 aa11.55□□□□□ -0.56
PTCH1-217ENST00000548420 MELTFP08582 738 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms