RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 OR10R2Q8NGX6 335 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 OR2AE1Q8NHA4 323 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 TNFAIP8L1Q8WVP5 186 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 STARD4Q96DR4 205 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 MARVELD1Q9BSK0 173 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 TMEM59Q9BXS4 323 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 CACNG6Q9BXT2 260 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 MSTNO14793 375 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 CRTAPO75718 401 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-215ENST00000547672 RAD51DO75771 328 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 TNFSF13O75888 250 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 CGAP01215 116 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 HNRNPCP07910 306 aaKnown RBP eCLIP11.64□□□□□ -0.55
PTCH1-215ENST00000547672 ADRB1P08588 477 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 TRAPPC2P0DI81 140 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 TRAPPC2BP0DI82 140 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 EDN3P14138 238 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 CPT2P23786 658 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 CEACAM8P31997 349 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-215ENST00000547672 KIR2DL3P43628 341 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 ID4P47928 161 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 EFNB2P52799 333 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 CASP6P55212 293 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 FOXG1P55316 489 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-215ENST00000547672 CXADRP78310 365 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 KLF9Q13886 244 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-215ENST00000547672 RSU1Q15404 277 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 PLCXD3Q63HM9 321 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 TMEM211Q6ICI0 200 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 GFRALQ6UXV0 394 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 BHLHA15Q7RTS1 189 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-215ENST00000547672 CD163Q86VB7 1156 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 MED12LQ86YW9 2145 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 SAXO1Q8IYX7 474 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 CISD2Q8N5K1 135 aaKnown RBP11.64□□□□□ -0.55
PTCH1-215ENST00000547672 ZNF610Q8N9Z0 462 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 CHST4Q8NCG5 386 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 PXT1Q8NFP0 134 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 OR5A2Q8NGI9 324 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 PIGCQ92535 297 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 ZNF71Q9NQZ8 489 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-215ENST00000547672 GPR173Q9NS66 373 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 STARD10Q9Y365 291 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 RHBDD3Q9Y3P4 386 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 SPEF1Q9Y4P9 236 aa11.64□□□□□ -0.55
PTCH1-215ENST00000547672 FAM230AA0A1W2PPH8 454 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 INMT-MINDY4F8WBC2 141 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 K7EM74 188 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 AKR7A2O43488 359 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 LANCL1O43813 399 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 CDC14BO60729 498 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 CA11O75493 328 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 LYZL6O75951 148 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 MPIG6BO95866 241 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 AKAIN1P0CW23 69 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 GTF2F2P13984 249 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 SPNP16150 400 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 ZNF14P17017 642 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-215ENST00000547672 TBPP20226 339 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 IL32P24001 234 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 ACKR3P25106 362 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 HLA-DMAP28067 261 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 RAB25P57735 213 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 TAS2R19P59542 299 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 HGFACQ04756 655 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 GK2Q14410 553 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-215ENST00000547672 CEACAM21Q3KPI0 293 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 CDNFQ49AH0 187 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 AGAP6Q5VW22 663 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 OLFML2AQ68BL7 652 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 VWA1Q6PCB0 445 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 FBXW12Q6X9E4 464 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 ASCL4Q6XD76 172 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 MKXQ8IYA7 352 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 CADM3Q8N126 398 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 PAQR4Q8N4S7 273 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-215ENST00000547672 FAM89BQ8N5H3 189 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 TMEM229BQ8NBD8 167 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 OR51T1Q8NGJ9 327 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 GPX8Q8TED1 209 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 MUCL1Q96DR8 90 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 RAB3CQ96E17 227 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 SOX7Q9BT81 388 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 BCL2L14Q9BZR8 327 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 ELL3Q9HB65 397 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-215ENST00000547672 RHOFQ9HBH0 211 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 IL36GQ9NZH8 169 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 NLKQ9UBE8 527 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 ZNF629Q9UEG4 869 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-215ENST00000547672 RAXQ9Y2V3 346 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 WDFY3Q8IZQ1 3526 aa11.63□□□□□ -0.55
PTCH1-215ENST00000547672 DMXL1Q9Y485 3027 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 MEIOCA2RUB1 952 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 C5orf63A6NC05 138 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 OR5H1A6NKK0 313 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 OR5B21A6NL26 309 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 CD300LBA8K4G0 201 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 RAB27BO00194 218 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 PRAF2O60831 178 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 TCRBP04435 133 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms