RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 B3GALT5-AS1P59052 145 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 PPIAP62937 165 aaKnown RBP11.14□□□□□ -0.63
SCAF11-209ENST00000547018 RSPO1Q2MKA7 263 aaPredicted RBP11.14□□□□□ -0.63
SCAF11-209ENST00000547018 TMEM123Q8N131 208 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 OR4K15Q8NH41 348 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 REEP6Q96HR9 211 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 A0A0A6YYD4 124 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 C5orf51A6NDU8 294 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 MGMTP16455 207 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 ARF1P84077 181 aaKnown RBP11.13□□□□□ -0.63
SCAF11-209ENST00000547018 PSG4Q00888 419 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 HLXQ14774 488 aaPredicted RBP11.13□□□□□ -0.63
SCAF11-209ENST00000547018 PABPC1L2AQ5JQF8 200 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 PEAR1Q5VY43 1037 aaPredicted RBP11.13□□□□□ -0.63
SCAF11-209ENST00000547018 FAM166AQ6J272 317 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 DOK3Q7L591 496 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 ZNF100Q8IYN0 542 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 NKAIN3Q8N8D7 197 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 OR10R2Q8NGX6 335 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 OR6S1Q8NH40 331 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 SGK3Q96BR1 496 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 ACKR4Q9NPB9 350 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 TAS2R8Q9NYW2 309 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 LIPGQ9Y5X9 500 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 MEIKINA0A087WXM9 373 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 C5orf49A4QMS7 147 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 HSPB2A8KAH6 182 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 M0R233 179 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 ERVH48-1M5A8F1 160 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 ONECUT2O95948 504 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 OR4E1P0C645 316 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 TSC22D1Q15714 1073 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 HSPB2Q16082 182 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 PLAC9Q5JTB6 97 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 C5orf24Q7Z6I8 188 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 TMEM251Q8N6I4 163 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 ADAD2Q8NCV1 583 aaKnown RBP11.13□□□□□ -0.63
SCAF11-209ENST00000547018 CSNK2A3Q8NEV1 391 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 ST8SIA4Q92187 359 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 TTTY12Q9BZ98 90 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 ABI3Q9P2A4 366 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 MED12LQ86YW9 2145 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 A0A1B0GUH1 482 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 RAD51DO75771 328 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 SPDEFO95238 335 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 GRB2P62993 217 aaKnown RBP11.13□□□□□ -0.63
SCAF11-209ENST00000547018 CSRP2Q16527 193 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 MOB3CQ70IA8 216 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 OR5M9Q8NGP3 310 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 COQ8AQ8NI60 647 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 RNF138Q8WVD3 245 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 NABP1Q96AH0 204 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 CCDC120Q96HB5 630 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 LPAR5Q9H1C0 372 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 OR10A2Q9H208 303 aa11.13□□□□□ -0.63
SCAF11-209ENST00000547018 SPENQ96T58 3664 aaKnown RBP11.13□□□□□ -0.63
SCAF11-209ENST00000547018 MEX3AA1L020 520 aaKnown RBP11.12□□□□□ -0.63
SCAF11-209ENST00000547018 CDC14BO60729 498 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 IGHEP01854 428 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 ERCC1P07992 297 aaPredicted RBP11.12□□□□□ -0.63
SCAF11-209ENST00000547018 PTGFRP43088 359 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 MEOX1P50221 254 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 IL13RA1P78552 427 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 RSU1Q15404 277 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 TMEM17Q86X19 198 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 STEAP2Q8NFT2 490 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 C15orf40Q8WUR7 153 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 PAPOLGQ9BWT3 736 aaKnown RBP11.12□□□□□ -0.63
SCAF11-209ENST00000547018 CST11Q9H112 138 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 PLEKHJ1Q9NW61 149 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 ANKRD34BA5PLL1 514 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 SYNGR4O95473 234 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 EDN3P14138 238 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 TMEM50BP56557 158 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 ATPAF1Q5TC12 328 aaPredicted RBP11.12□□□□□ -0.63
SCAF11-209ENST00000547018 OR2AK2Q8NG84 335 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 OR14K1Q8NGZ2 314 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 OR1F12Q8NHA8 337 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 TOMM40LQ969M1 308 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 SLA2Q9H6Q3 261 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 GSKIPQ9P0R6 139 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 B4GALT7Q9UBV7 327 aa11.12□□□□□ -0.63
SCAF11-209ENST00000547018 OR2AT4A6NND4 320 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 ETV2O00321 342 aaPredicted RBP11.11□□□□□ -0.63
SCAF11-209ENST00000547018 FARS2O95363 451 aaKnown RBP11.11□□□□□ -0.63
SCAF11-209ENST00000547018 SERPINA5P05154 406 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 CNR1P21554 472 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 FXYD4P59646 89 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 FOXO1Q12778 655 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 PLCXD3Q63HM9 321 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 C12orf45Q8N5I9 185 aaPredicted RBP11.11□□□□□ -0.63
SCAF11-209ENST00000547018 NEK7Q8TDX7 302 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 FOXRED1Q96CU9 486 aaPredicted RBP11.11□□□□□ -0.63
SCAF11-209ENST00000547018 CMTM3Q96MX0 182 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 FAAP24Q9BTP7 215 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 VSIG4Q9Y279 399 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 COL5A1P20908 1838 aaPredicted RBP11.11□□□□□ -0.63
SCAF11-209ENST00000547018 DISC1C4P0D8 188 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 NR2C1P13056 603 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 FSTP19883 344 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms