RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TSLPQ969D9 159 aa12.55□□□□□ -0.4
SRP54-202ENST00000546080 TCTN2Q96GX1 697 aa12.55□□□□□ -0.4
SRP54-202ENST00000546080 DMRT1Q9Y5R6 373 aa12.55□□□□□ -0.4
SRP54-202ENST00000546080 CHD7Q9P2D1 2997 aa12.55□□□□□ -0.4
SRP54-202ENST00000546080 FTCDNL1E5RQL4 147 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 IFNA21P01568 189 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 IGKV3-11P04433 115 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 RD3LP0DJH9 198 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 DCAF7P61962 342 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 POU3F1Q03052 451 aaPredicted RBP12.54□□□□□ -0.4
SRP54-202ENST00000546080 TFF2Q03403 129 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 SURF2Q15527 256 aaPredicted RBP12.54□□□□□ -0.4
SRP54-202ENST00000546080 NSUN5P2Q63ZY6 315 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 ABHD12BQ7Z5M8 362 aaPredicted RBP12.54□□□□□ -0.4
SRP54-202ENST00000546080 PPP1R3BQ86XI6 285 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 PNLDC1Q8NA58 520 aaKnown RBP12.54□□□□□ -0.4
SRP54-202ENST00000546080 GPR119Q8TDV5 335 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 ZNF721Q8TF20 911 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 ERGIC1Q969X5 290 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 GGACTQ9BVM4 153 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 TOLLIPQ9H0E2 274 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 OR10A2Q9H208 303 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 PLEKHA2Q9HB19 425 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 KCNJ16Q9NPI9 418 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 SLC2A4RGQ9NR83 387 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 MED29Q9NX70 200 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 TUBD1Q9UJT1 453 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 ATXN7L1Q9ULK2 861 aaPredicted RBP12.54□□□□□ -0.4
SRP54-202ENST00000546080 B4DGG1 531 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 H0YIG0 161 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 NDUFS6O75380 124 aaKnown RBP12.54□□□□□ -0.4
SRP54-202ENST00000546080 DDAH2O95865 285 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 SEC11BP0C7V7 166 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 DANCRP0C864 163 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 HTR5AP47898 357 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 RAB1AP62820 205 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 C1orf61Q13536 156 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 CHRFAM7AQ494W8 412 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 LCN10Q6JVE6 187 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 RPUSD3Q6P087 351 aaKnown RBP12.54□□□□□ -0.4
SRP54-202ENST00000546080 HIST2H3AQ71DI3 136 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 SLC22A18ASQ8N1D0 253 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 OR51T1Q8NGJ9 327 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 SCRT1Q9BWW7 348 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 MOB1AQ9H8S9 216 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 LANCL2Q9NS86 450 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 PPP4R1LQ9P1A2 415 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 LRP4O75096 1905 aa12.54□□□□□ -0.4
SRP54-202ENST00000546080 BORCS7-ASMTA0A0B4J1R7 106 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 ZNF729A6NN14 1252 aaPredicted RBP12.53□□□□□ -0.4
SRP54-202ENST00000546080 CTSEP14091 401 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 NME1P15531 152 aaKnown RBP12.53□□□□□ -0.4
SRP54-202ENST00000546080 PPM1FP49593 454 aaPredicted RBP12.53□□□□□ -0.4
SRP54-202ENST00000546080 UCP2P55851 309 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 ZP4Q12836 540 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.53□□□□□ -0.4
SRP54-202ENST00000546080 SGPP2Q8IWX5 399 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 C9orf40Q8IXQ3 194 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 OR10S1Q8NGN2 331 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 INTS12Q96CB8 462 aaKnown RBP12.53□□□□□ -0.4
SRP54-202ENST00000546080 PFDN5Q99471 154 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 PBDC1Q9BVG4 233 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 C19orf12Q9NSK7 152 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 SUSD2Q9UGT4 822 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 ZNF878C9JN71 531 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 PRH1P02810 166 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 LBX1P52954 281 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 SLC35A1P78382 337 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 HSD11B2P80365 405 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 HSF1Q00613 529 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 GGNBP1Q5YKI7 109 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 CLEC9AQ6UXN8 241 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 H1FNTQ75WM6 255 aaPredicted RBP12.53□□□□□ -0.4
SRP54-202ENST00000546080 C1QL4Q86Z23 238 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 SULF2Q8IWU5 870 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 FAM71F1Q96KD3 344 aaPredicted RBP12.53□□□□□ -0.4
SRP54-202ENST00000546080 C5orf34Q96MH7 638 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 SPSB2Q99619 263 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 SLC35B3Q9H1N7 401 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 ARV1Q9H2C2 271 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 SOHLH2Q9NX45 425 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 POLR1DQ9Y2S0 133 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 FBXO7Q9Y3I1 522 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 MMACHCQ9Y4U1 282 aa12.53□□□□□ -0.4
SRP54-202ENST00000546080 C5orf67F2Z3F1 127 aa12.52□□□□□ -0.4
SRP54-202ENST00000546080 OR2C1O95371 312 aa12.52□□□□□ -0.4
SRP54-202ENST00000546080 GIMD1P0DJR0 217 aa12.52□□□□□ -0.4
SRP54-202ENST00000546080 SLC2A1P11166 492 aa12.52□□□□□ -0.4
SRP54-202ENST00000546080 CHATP28329 748 aa12.52□□□□□ -0.4
SRP54-202ENST00000546080 ECI1P42126 302 aa12.52□□□□□ -0.4
SRP54-202ENST00000546080 ZNF84P51523 738 aa12.52□□□□□ -0.4
SRP54-202ENST00000546080 ACY1Q03154 408 aa12.52□□□□□ -0.4
SRP54-202ENST00000546080 TLE3Q04726 772 aa12.52□□□□□ -0.4
SRP54-202ENST00000546080 ZNF239Q16600 458 aaKnown RBP12.52□□□□□ -0.4
SRP54-202ENST00000546080 C9orf152Q5JTZ5 239 aa12.52□□□□□ -0.4
SRP54-202ENST00000546080 MRPL24Q96A35 216 aaKnown RBP12.52□□□□□ -0.4
SRP54-202ENST00000546080 MRGPRX1Q96LB2 322 aa12.52□□□□□ -0.4
SRP54-202ENST00000546080 TGM7Q96PF1 710 aa12.52□□□□□ -0.4
SRP54-202ENST00000546080 SOX7Q9BT81 388 aa12.52□□□□□ -0.4
SRP54-202ENST00000546080 CRISPLD2Q9H0B8 497 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms