RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 D2HGDHQ8N465 521 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF561Q8N587 486 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 UBAC2Q8NBM4 344 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 NOXO1Q8NFA2 376 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 OR8G5Q8NG78 346 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 OR6X1Q8NH79 312 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 SSC4DQ8WTU2 575 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 C11orf40Q8WZ69 217 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 MRGPRFQ96AM1 343 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 INTS12Q96CB8 462 aaKnown RBP5.71□□□□□ -1.5
SNHG1-225ENST00000545920 ABHD14BQ96IU4 210 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 SEC22AQ96IW7 307 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 TGM7Q96PF1 710 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 TAAR9Q96RI9 348 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 GAL3ST4Q96RP7 486 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 MICU1Q9BPX6 476 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 SELENOIQ9C0D9 397 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 SLC5A7Q9GZV3 580 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 OR10A2Q9H208 303 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 ARV1Q9H2C2 271 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 C7orf69Q9H7B7 122 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 UNKLQ9H9P5 680 aaKnown RBP5.71□□□□□ -1.5
SNHG1-225ENST00000545920 RHOFQ9HBH0 211 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF304Q9HCX3 659 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 TREM1Q9NP99 234 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 AP5S1Q9NUS5 200 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 COA4Q9NYJ1 87 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 MYEF2Q9P2K5 600 aaKnown RBP5.71□□□□□ -1.5
SNHG1-225ENST00000545920 CTSFQ9UBX1 484 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF230Q9UIE0 474 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF391Q9UJN7 358 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 TUBD1Q9UJT1 453 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 FBXO4Q9UKT5 387 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 OSGIN2Q9Y236 505 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 HDGFL3Q9Y3E1 203 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 PIAS3Q9Y6X2 628 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 SNRNP200O75643 2136 aaKnown RBP5.71□□□□□ -1.5
SNHG1-225ENST00000545920 IGLV3-12A0A075B6K2 115 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 A0A087WZY1 265 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 C13orf42A0A1B0GVH6 325 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 BTBD17A6NE02 478 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 C1orf196B1AJZ1 125 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 E5RGE8 158 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 RNASEK-C17orf49H0YIS7 233 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 GPR31O00270 319 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 NUPL2O15504 423 aaKnown RBP5.7□□□□□ -1.5
SNHG1-225ENST00000545920 VAMP5O95183 116 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 ONECUT2O95948 504 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 ACTL6AO96019 429 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 IGLV3-1P01715 115 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 GLAP06280 429 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 CD27P26842 260 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 AVPR2P30518 371 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 RPS27P42677 84 aaKnown RBP5.7□□□□□ -1.5
SNHG1-225ENST00000545920 HNRNPKP61978 463 aaKnown RBP eCLIP5.7□□□□□ -1.5
SNHG1-225ENST00000545920 PPP1CAP62136 330 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 SRPXP78539 464 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 ZP2Q05996 745 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 PDZK1IP1Q13113 114 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 ERV3-1Q14264 604 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 MELKQ14680 651 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 RHEBQ15382 184 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 NSDHLQ15738 373 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 RAB30Q15771 203 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 SMAD2Q15796 467 aaKnown RBP5.7□□□□□ -1.5
SNHG1-225ENST00000545920 LRRC37A5PQ49AS3 106 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 C14orf28Q4W4Y0 310 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 TMEM268Q5VZI3 342 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 TMEM71Q6P5X7 295 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 SLC25A47Q6Q0C1 308 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 GLIPR1L1Q6UWM5 242 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 CLEC18BQ6UXF7 455 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 UNQ6126/PRO20091Q6UXV3 157 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 HIST2H3AQ71DI3 136 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 RABEPKQ7Z6M1 372 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 SGPP2Q8IWX5 399 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 UEVLDQ8IX04 471 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 CISD2Q8N5K1 135 aaKnown RBP5.7□□□□□ -1.5
SNHG1-225ENST00000545920 LRTM2Q8N967 370 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 ZSCAN4Q8NAM6 433 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-225ENST00000545920 ADAD2Q8NCV1 583 aaKnown RBP5.7□□□□□ -1.5
SNHG1-225ENST00000545920 CADM4Q8NFZ8 388 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 OR4S1Q8NGB4 309 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 OR52N4Q8NGI2 321 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 OR4A4PQ8NGN8 299 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 SVIPQ8NHG7 77 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 MARCH1Q8TCQ1 289 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 PAQR8Q8TEZ7 354 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 CASTOR1Q8WTX7 329 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 NTNG2Q96CW9 530 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 MALSU1Q96EH3 234 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 ADAT3Q96EY9 351 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-225ENST00000545920 GALNT14Q96FL9 552 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 TMEM41AQ96HV5 264 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 C1orf147Q96MC9 270 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-225ENST00000545920 C5orf34Q96MH7 638 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 OXGR1Q96P68 337 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 ELF4Q99607 663 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms