RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-223	ENST00000544669	WDFY1	Q8IWB7	410 aa		11.47	□□□□□ -0.57
CPSF7-223	ENST00000544669	UBALD2	Q8IYN6	164 aa		11.47	□□□□□ -0.57
CPSF7-223	ENST00000544669	SVBP	Q8N300	66 aa		11.47	□□□□□ -0.57
CPSF7-223	ENST00000544669	ADAD2	Q8NCV1	583 aa	Known RBP	11.47	□□□□□ -0.57
CPSF7-223	ENST00000544669	TMEM104	Q8NE00	496 aa		11.47	□□□□□ -0.57
CPSF7-223	ENST00000544669	HLA-C	Q95604	372 aa		11.47	□□□□□ -0.57
CPSF7-223	ENST00000544669	ARHGAP5-AS1	Q96IT6	56 aa		11.47	□□□□□ -0.57
CPSF7-223	ENST00000544669	IMMP1L	Q96LU5	166 aa		11.47	□□□□□ -0.57
CPSF7-223	ENST00000544669	NICN1	Q9BSH3	213 aa		11.47	□□□□□ -0.57
CPSF7-223	ENST00000544669	C5orf66	Q9H5L9	145 aa		11.47	□□□□□ -0.57
CPSF7-223	ENST00000544669	TMEM100	Q9NV29	134 aa		11.47	□□□□□ -0.57
CPSF7-223	ENST00000544669	HSF4	Q9ULV5	492 aa		11.47	□□□□□ -0.57
CPSF7-223	ENST00000544669	SIT1	Q9Y3P8	196 aa		11.47	□□□□□ -0.57
CPSF7-223	ENST00000544669	TP53BP1	Q12888	1972 aa	Predicted RBP	11.46	□□□□□ -0.57
CPSF7-223	ENST00000544669		M0R135	149 aa		11.46	□□□□□ -0.57
CPSF7-223	ENST00000544669	IFNA21	P01568	189 aa		11.46	□□□□□ -0.57
CPSF7-223	ENST00000544669	RBMX	P38159	391 aa	Known RBP	11.46	□□□□□ -0.57
CPSF7-223	ENST00000544669	PCBD1	P61457	104 aa		11.46	□□□□□ -0.57
CPSF7-223	ENST00000544669	SMCO1	Q147U7	214 aa		11.46	□□□□□ -0.57
CPSF7-223	ENST00000544669	KIF26B	Q2KJY2	2108 aa		11.46	□□□□□ -0.57
CPSF7-223	ENST00000544669	TMEM156	Q8N614	296 aa		11.46	□□□□□ -0.57
CPSF7-223	ENST00000544669	OR9K2	Q8NGE7	335 aa		11.46	□□□□□ -0.57
CPSF7-223	ENST00000544669	SNIP1	Q8TAD8	396 aa	Known RBP	11.46	□□□□□ -0.57
CPSF7-223	ENST00000544669	NTNG2	Q96CW9	530 aa		11.46	□□□□□ -0.57
CPSF7-223	ENST00000544669	ZNF799	Q96GE5	643 aa		11.46	□□□□□ -0.57
CPSF7-223	ENST00000544669	ULBP2	Q9BZM5	246 aa		11.46	□□□□□ -0.57
CPSF7-223	ENST00000544669	METTL9	Q9H1A3	318 aa		11.46	□□□□□ -0.57
CPSF7-223	ENST00000544669	OSGIN2	Q9Y236	505 aa		11.46	□□□□□ -0.57
CPSF7-223	ENST00000544669	KCNIP3	Q9Y2W7	256 aa		11.46	□□□□□ -0.57
CPSF7-223	ENST00000544669		A0A0A6YYD4	124 aa		11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	FOXI3	A8MTJ6	420 aa	Predicted RBP	11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	IFNA2	P01563	188 aa		11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	CSTB	P04080	98 aa	Known RBP	11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	CST2	P09228	141 aa		11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	PGAM2	P15259	253 aa		11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	RAB35	Q15286	201 aa		11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	NKAPL	Q5M9Q1	402 aa		11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	PXDC1	Q5TGL8	231 aa		11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	RAET1L	Q5VY80	246 aa		11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	PLXDC2	Q6UX71	529 aa		11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	SGPP2	Q8IWX5	399 aa		11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	C20orf196	Q8IYI0	205 aa		11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	RELL2	Q8NC24	303 aa	Predicted RBP	11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	SEMA6D	Q8NFY4	1073 aa		11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	RELT	Q969Z4	430 aa		11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	PECR	Q9BY49	303 aa		11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	BANF2	Q9H503	90 aa		11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	HPF1	Q9NWY4	346 aa		11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	EHF	Q9NZC4	300 aa		11.46	□□□□□ -0.58
CPSF7-223	ENST00000544669	MYO9B	Q13459	2157 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	IGKV1-9	A0A0C4DH69	117 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	LY6G6E	A0A0G2JKS1	128 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669		F5H5K5	113 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	STMND1	H3BQB6	276 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	ABCD4	O14678	606 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	TPD52L2	O43399	206 aa	Known RBP	11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	CTSD	P07339	412 aa	Predicted RBP	11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	SLC2A1	P11166	492 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	FCGR2A	P12318	317 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	CTRB1	P17538	263 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	DTYMK	P23919	212 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	NPY4R	P50391	375 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	RAC3	P60763	192 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	MC2R	Q01718	297 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	ENDOG	Q14249	297 aa	Known RBP	11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	HLA-B	Q31612	363 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	CTRB2	Q6GPI1	263 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	RPS19BP1	Q86WX3	136 aa	Known RBP	11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	TMEM123	Q8N131	208 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	ST6GALNAC5	Q9BVH7	336 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	RBM24	Q9BX46	236 aa	Known RBP	11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	PLEKHJ1	Q9NW61	149 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	PLEK2	Q9NYT0	353 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	ZNF319	Q9P2F9	582 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	PIGL	Q9Y2B2	252 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	MRPS18C	Q9Y3D5	142 aa	Known RBP	11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669		U3KQA8	63 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	ADAMTS9	Q9P2N4	1935 aa		11.45	□□□□□ -0.58
CPSF7-223	ENST00000544669	LAMA2	P24043	3122 aa	Known RBP	11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	PRSS44	E7EML9	344 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	LINC01387	J3KSC0	135 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	LGALS8	O00214	317 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	LIPC	P11150	499 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	CD79A	P11912	226 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	PMEL	P40967	661 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	BLOC1S1	P78537	153 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	ATXN7L3	Q14CW9	347 aa	Predicted RBP	11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	LHFPL2	Q6ZUX7	228 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	SULF2	Q8IWU5	870 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	SPAG16	Q8N0X2	631 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	GPR137C	Q8N3F9	429 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	OR2Y1	Q8NGV0	311 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	CPT1C	Q8TCG5	803 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	MR1	Q95460	341 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	RNF126	Q9BV68	326 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	MMP26	Q9NRE1	261 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	DECR2	Q9NUI1	292 aa		11.44	□□□□□ -0.58
CPSF7-223	ENST00000544669	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms