RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 URM1Q9BTM9 101 aaKnown RBP11.05□□□□□ -0.64
PAAF1-214ENST00000544552 CST11Q9H112 138 aa11.05□□□□□ -0.64
PAAF1-214ENST00000544552 LPAR5Q9H1C0 372 aa11.05□□□□□ -0.64
PAAF1-214ENST00000544552 APC2O95996 2303 aa11.05□□□□□ -0.64
PAAF1-214ENST00000544552 GTF3C1Q12789 2109 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 DOCK7Q96N67 2140 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 MBD3L4A6NDZ8 208 aaPredicted RBP11.04□□□□□ -0.64
PAAF1-214ENST00000544552 MBD3L3A6NE82 208 aaPredicted RBP11.04□□□□□ -0.64
PAAF1-214ENST00000544552 MBD3L5A6NJ08 208 aaPredicted RBP11.04□□□□□ -0.64
PAAF1-214ENST00000544552 J3QW42 95 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 K7EM74 188 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 CCNKO75909 580 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 APLNRP35414 380 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 CD300CQ08708 224 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 MALLQ13021 153 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 EIF2S3LQ2VIR3 472 aaKnown RBP11.04□□□□□ -0.64
PAAF1-214ENST00000544552 PCGF3Q3KNV8 242 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 HIKESHIQ53FT3 197 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 ASCL4Q6XD76 172 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 LHFPL2Q6ZUX7 228 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 GCNT2Q8N0V5 402 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 TMEM229BQ8NBD8 167 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 ACBD4Q8NC06 268 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 C1orf162Q8NEQ5 155 aaPredicted RBP11.04□□□□□ -0.64
PAAF1-214ENST00000544552 OR6F1Q8NGZ6 308 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 MBD3L2Q8NHZ7 208 aaPredicted RBP11.04□□□□□ -0.64
PAAF1-214ENST00000544552 UBASH3BQ8TF42 649 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 TMEM59Q9BXS4 323 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 NUDT15Q9NV35 164 aa11.04□□□□□ -0.64
PAAF1-214ENST00000544552 MRPL15Q9P015 296 aaKnown RBP11.04□□□□□ -0.64
PAAF1-214ENST00000544552 C7orf66A4D0T2 115 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 WIPF3A6NGB9 483 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 WDR1O75083 606 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 GSTP1P09211 210 aaKnown RBP11.03□□□□□ -0.64
PAAF1-214ENST00000544552 COX5AP20674 150 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 RBP2P50120 134 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 CCR6P51684 374 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 FUT6P51993 359 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 MTCP1P56278 107 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 ZP1P60852 638 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 CXADRP78310 365 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 GUCA2AQ02747 115 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 GABRA6Q16445 453 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 CDNFQ49AH0 187 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 TMEM104Q8NE00 496 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 STEAP2Q8NFT2 490 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 OR56B1Q8NGI3 324 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 TNFAIP8L1Q8WVP5 186 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 PIGTQ969N2 578 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 TM2D1Q9BX74 207 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 GPR173Q9NS66 373 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 KCNN3Q9UGI6 736 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 ALG5Q9Y673 324 aa11.03□□□□□ -0.64
PAAF1-214ENST00000544552 ICMTO60725 284 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 MPIG6BO95866 241 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 HOXD4P09016 255 aaPredicted RBP11.02□□□□□ -0.64
PAAF1-214ENST00000544552 H2AFB2P0C5Z0 115 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 AKAIN1P0CW23 69 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 CCNOP22674 350 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 VEGFCP49767 419 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 TAS2R19P59542 299 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 RPS27AP62979 156 aaKnown RBP11.02□□□□□ -0.64
PAAF1-214ENST00000544552 GK2Q14410 553 aaPredicted RBP11.02□□□□□ -0.64
PAAF1-214ENST00000544552 TMEM255AQ5JRV8 349 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 ZNF324BQ6AW86 544 aaPredicted RBP11.02□□□□□ -0.64
PAAF1-214ENST00000544552 SFRP4Q6FHJ7 346 aaPredicted RBP11.02□□□□□ -0.64
PAAF1-214ENST00000544552 ZNF585AQ6P3V2 769 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 Q6ZTK2 550 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 C1QL2Q7Z5L3 287 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 MDP1Q86V88 176 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 CSNK2A3Q8NEV1 391 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 OR5L1Q8NGL2 311 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 NPRL2Q8WTW4 380 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 BORCS8Q96FH0 119 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 ABHD17AQ96GS6 310 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 S100A13Q99584 98 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 GAL3ST1Q99999 423 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.02□□□□□ -0.64
PAAF1-214ENST00000544552 ING4Q9UNL4 249 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 SLC7A11Q9UPY5 501 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 STARD10Q9Y365 291 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 ACACAQ13085 2346 aa11.02□□□□□ -0.64
PAAF1-214ENST00000544552 ZNHIT1O43257 154 aa11.02□□□□□ -0.65
PAAF1-214ENST00000544552 ZNF780AO75290 641 aaPredicted RBP11.02□□□□□ -0.65
PAAF1-214ENST00000544552 TNFSF13O75888 250 aa11.02□□□□□ -0.65
PAAF1-214ENST00000544552 CST4P01036 141 aa11.02□□□□□ -0.65
PAAF1-214ENST00000544552 CGAP01215 116 aa11.02□□□□□ -0.65
PAAF1-214ENST00000544552 CD74P04233 296 aa11.02□□□□□ -0.65
PAAF1-214ENST00000544552 ZNF14P17017 642 aaPredicted RBP11.02□□□□□ -0.65
PAAF1-214ENST00000544552 MECP2P51608 486 aaKnown RBP11.02□□□□□ -0.65
PAAF1-214ENST00000544552 ATP1B3P54709 279 aa11.02□□□□□ -0.65
PAAF1-214ENST00000544552 UBE2NP61088 152 aaKnown RBP11.02□□□□□ -0.65
PAAF1-214ENST00000544552 ARL6IP1Q15041 203 aa11.02□□□□□ -0.65
PAAF1-214ENST00000544552 TBR1Q16650 682 aa11.02□□□□□ -0.65
PAAF1-214ENST00000544552 PNLIPRP3Q17RR3 467 aa11.02□□□□□ -0.65
PAAF1-214ENST00000544552 SLC22A6Q4U2R8 563 aa11.02□□□□□ -0.65
PAAF1-214ENST00000544552 GABRG1Q8N1C3 465 aa11.02□□□□□ -0.65
PAAF1-214ENST00000544552 CNEP1R1Q8N9A8 125 aa11.02□□□□□ -0.65
PAAF1-214ENST00000544552 CHST4Q8NCG5 386 aa11.02□□□□□ -0.65
PAAF1-214ENST00000544552 PXT1Q8NFP0 134 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms