RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 ST6GAL1P15907 406 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 ERVS71-1P61550 626 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 GAL3ST2Q9H3Q3 398 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 MASP2O00187 686 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 GOSR1O95249 250 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 MMP15P51511 669 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 SLC16A13Q7RTY0 426 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 BTLAQ7Z6A9 289 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 MMP26Q9NRE1 261 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 NPTNQ9Y639 398 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 FBP1P09467 338 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 OPRK1P41145 380 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 ANKRD53Q8N9V6 530 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 MS4A10Q96PG2 267 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 DUSP21Q9H596 190 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 HYAL3O43820 417 aaPredicted RBP13.91□□□□□ -0.18
CHD4-210ENST00000544040 ATF1P18846 271 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 AAMDCQ9H7C9 122 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 DOK5Q9P104 306 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 POMT2Q9UKY4 750 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 MON2Q7Z3U7 1717 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 GFYI3L273 518 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 M0R1X1 148 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 FCN1O00602 326 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 DSCR3O14972 297 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 MEOX1P50221 254 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 TMEM183BQ1AE95 376 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 TMEM128Q5BJH2 165 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 PTCRAQ6ISU1 281 aaPredicted RBP13.9□□□□□ -0.18
CHD4-210ENST00000544040 ZBP1Q9H171 429 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 LOXHD1Q8IVV2 1947 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 WNT1P04628 370 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 PLA1AQ53H76 456 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 OR1J1Q8NGS3 322 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 PRSS3P2Q8NHM4 247 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 WDR61Q9GZS3 305 aaKnown RBP13.9□□□□□ -0.18
CHD4-210ENST00000544040 IGLV3-10A0A075B6K4 115 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 PSMB2P49721 201 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 MYBPHQ13203 477 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 DND1Q8IYX4 353 aaKnown RBP13.9□□□□□ -0.18
CHD4-210ENST00000544040 OR8D4Q8NGM9 314 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 MBTPS2O43462 519 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 KCNJ3P48549 501 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 FOXF1Q12946 379 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 FKBP2P26885 142 aaKnown RBP13.9□□□□□ -0.18
CHD4-210ENST00000544040 ST3GAL2Q16842 350 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 OR2W3Q7Z3T1 314 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 SMIM4Q8WVI0 70 aa13.9□□□□□ -0.18
CHD4-210ENST00000544040 ALKBH3Q96Q83 286 aaPredicted RBP13.9□□□□□ -0.18
CHD4-210ENST00000544040 COL14A1Q05707 1796 aaKnown RBP13.9□□□□□ -0.18
CHD4-210ENST00000544040 NUP188Q5SRE5 1749 aa13.9□□□□□ -0.19
CHD4-210ENST00000544040 TARM1B6A8C7 271 aa13.9□□□□□ -0.19
CHD4-210ENST00000544040 M0QZ24 198 aa13.9□□□□□ -0.19
CHD4-210ENST00000544040 MYF5P13349 255 aa13.9□□□□□ -0.19
CHD4-210ENST00000544040 ABCD3P28288 659 aa13.9□□□□□ -0.19
CHD4-210ENST00000544040 CEACAM6P40199 344 aa13.9□□□□□ -0.19
CHD4-210ENST00000544040 BAHD1Q8TBE0 780 aaPredicted RBP13.9□□□□□ -0.19
CHD4-210ENST00000544040 EXTL1Q92935 676 aa13.9□□□□□ -0.19
CHD4-210ENST00000544040 PELI1Q96FA3 418 aa13.9□□□□□ -0.19
CHD4-210ENST00000544040 GPR137Q96N19 417 aa13.9□□□□□ -0.19
CHD4-210ENST00000544040 ZNF391Q9UJN7 358 aa13.9□□□□□ -0.19
CHD4-210ENST00000544040 B9D1Q9UPM9 204 aa13.9□□□□□ -0.19
CHD4-210ENST00000544040 LRP12Q9Y561 859 aa13.9□□□□□ -0.19
CHD4-210ENST00000544040 CD200P41217 278 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 GNG4P50150 75 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 LINC00299Q6ZSB3 139 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 PTOV1Q86YD1 416 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 OR5D13Q8NGL4 314 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 FOXJ3Q9UPW0 622 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 KCNE3Q9Y6H6 103 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 HTR1DP28221 377 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 BSGP35613 385 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 PPICP45877 212 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 TUBAL3A6NHL2 446 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 RPEL1Q2QD12 228 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 DEFB109BQ30KR1 87 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.89□□□□□ -0.19
CHD4-210ENST00000544040 KIRREL2Q6UWL6 708 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 MRGPREQ86SM8 312 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 A0A1W2PR80 420 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 RPL24P83731 157 aaKnown RBP13.89□□□□□ -0.19
CHD4-210ENST00000544040 COTL1Q14019 142 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 FAM78BQ5VT40 261 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 ZDHHC16Q969W1 377 aa13.89□□□□□ -0.19
CHD4-210ENST00000544040 TMEM272A0A1B0GTI8 110 aa13.88□□□□□ -0.19
CHD4-210ENST00000544040 ZNF737O75373 536 aa13.88□□□□□ -0.19
CHD4-210ENST00000544040 SLC6A12P48065 614 aa13.88□□□□□ -0.19
CHD4-210ENST00000544040 CAMPP49913 170 aa13.88□□□□□ -0.19
CHD4-210ENST00000544040 FAHD1Q6P587 224 aa13.88□□□□□ -0.19
CHD4-210ENST00000544040 NOXO1Q8NFA2 376 aa13.88□□□□□ -0.19
CHD4-210ENST00000544040 KCNE4Q8WWG9 221 aa13.88□□□□□ -0.19
CHD4-210ENST00000544040 PRRX2Q99811 253 aa13.88□□□□□ -0.19
CHD4-210ENST00000544040 TRGV10A0A0A0MS01 117 aa13.88□□□□□ -0.19
CHD4-210ENST00000544040 TCRBV5S1A1TA0A578 114 aa13.88□□□□□ -0.19
CHD4-210ENST00000544040 FUT6P51993 359 aa13.88□□□□□ -0.19
CHD4-210ENST00000544040 CMTM3Q96MX0 182 aa13.88□□□□□ -0.19
CHD4-210ENST00000544040 FGF20Q9NP95 211 aaPredicted RBP13.88□□□□□ -0.19
CHD4-210ENST00000544040 FZD2Q14332 565 aa13.88□□□□□ -0.19
CHD4-210ENST00000544040 RGS7BPQ6MZT1 257 aaPredicted RBP13.88□□□□□ -0.19
CHD4-210ENST00000544040 UQCC3Q6UW78 93 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms