RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 RASSF4Q9H2L5 321 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 TNFRSF19Q9NS68 423 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 PDP1Q9P0J1 537 aaPredicted RBP10.85□□□□□ -0.67
RTN3-213ENST00000543552 ONECUT1Q9UBC0 465 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 FAM96BQ9Y3D0 163 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 RHBDD3Q9Y3P4 386 aa10.85□□□□□ -0.67
RTN3-213ENST00000543552 BTBD17A6NE02 478 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 CDIPTO14735 213 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 CST4P01036 141 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 ANXA8P13928 327 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 OMGP23515 440 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 RPS7P62081 194 aaKnown RBP10.84□□□□□ -0.67
RTN3-213ENST00000543552 GUCA2AQ02747 115 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 PRDX4Q13162 271 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 KCTD18Q6PI47 426 aaPredicted RBP10.84□□□□□ -0.67
RTN3-213ENST00000543552 TREML4Q6UXN2 200 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 LDLRAD3Q86YD5 345 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 C11orf53Q8IXP5 236 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 ZDHHC23Q8IYP9 409 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 NPRL2Q8WTW4 380 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 MED30Q96HR3 178 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 AMELYQ99218 206 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 CCL13Q99616 98 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 PKP2Q99959 881 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 THTPAQ9BU02 230 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 DPAGT1Q9H3H5 408 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 HAO2Q9NYQ3 351 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 LAMP5Q9UJQ1 280 aa10.84□□□□□ -0.67
RTN3-213ENST00000543552 ACOD1A6NK06 481 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 ZNF850A8MQ14 1090 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 ACOT8O14734 319 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 SELENOFO60613 162 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 FBP1P09467 338 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 EEF1B2P24534 225 aaKnown RBP10.83□□□□□ -0.68
RTN3-213ENST00000543552 POU4F2Q12837 409 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 IKZF1Q13422 519 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 DNAL1Q4LDG9 190 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 ATPAF1Q5TC12 328 aaPredicted RBP10.83□□□□□ -0.68
RTN3-213ENST00000543552 LCN1P1Q5VSP4 162 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 OLFML2AQ68BL7 652 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 STUMQ69YW2 141 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 DEGS2Q6QHC5 323 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 METAP1DQ6UB28 335 aaPredicted RBP10.83□□□□□ -0.68
RTN3-213ENST00000543552 VMO1Q7Z5L0 202 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 KRT77Q7Z794 578 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 CPOQ8IVL8 374 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 FAM216BQ8N7L0 139 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 LY6G5BQ8NDX9 201 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 CANT1Q8WVQ1 401 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 WFDC12Q8WWY7 111 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 OR5P3Q8WZ94 311 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 PRRG3Q9BZD7 231 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 TAS2R1Q9NYW7 299 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 TMEM14AQ9Y6G1 99 aa10.83□□□□□ -0.68
RTN3-213ENST00000543552 A0A0U1RQK1 487 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 A0A0U1RQV5 110 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 ZNF816-ZNF321PA0A0X1KG74 233 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 CLPSL1A2RUU4 121 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.82□□□□□ -0.68
RTN3-213ENST00000543552 T-ENOLP0DO92 83 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 ATP6V1B1P15313 513 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 MAP2K3P46734 347 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 FLOT2Q14254 428 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 BRICD5Q6PL45 260 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 GDPGP1Q6ZNW5 385 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 SPATA24Q86W54 205 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 COMMD2Q86X83 199 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 OR8B12Q8NGG6 310 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 H1FXQ92522 213 aaKnown RBP10.82□□□□□ -0.68
RTN3-213ENST00000543552 PIGCQ92535 297 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 RNF170Q96K19 258 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 CLPTM1LQ96KA5 538 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 RAB3IPQ96QF0 476 aaPredicted RBP10.82□□□□□ -0.68
RTN3-213ENST00000543552 MROQ9BYG7 248 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 YIPF3Q9GZM5 350 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 SLC25A19Q9HC21 320 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 C1RLQ9NZP8 487 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 ZNF319Q9P2F9 582 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 DNAJB9Q9UBS3 223 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 LRP12Q9Y561 859 aa10.82□□□□□ -0.68
RTN3-213ENST00000543552 M0QZ24 198 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 GYG2O15488 501 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 WIPF1O43516 503 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 GPR137BO60478 399 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 PAHP00439 452 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 IGHV4-59P01825 116 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 ALOX5APP20292 161 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 ACKR3P25106 362 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 IER3P46695 156 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 TGM4P49221 684 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 GNG3P63215 75 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 CDK5Q00535 292 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 BLMHQ13867 455 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 ZNF829Q3KNS6 432 aaPredicted RBP10.81□□□□□ -0.68
RTN3-213ENST00000543552 FAM76BQ5HYJ3 339 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 NCR3LG1Q68D85 454 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 C1orf122Q6ZSJ8 110 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 THAP5Q7Z6K1 395 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 C8orf46Q8TAG6 207 aa10.81□□□□□ -0.68
RTN3-213ENST00000543552 ASB17Q8WXJ9 295 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms