RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 AESQ08117 197 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 EXT1Q16394 746 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 ACKR1Q16570 336 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 ALG10Q5BKT4 473 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 LRRC73Q5JTD7 316 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 C6orf136Q5SQH8 315 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 SYPL2Q5VXT5 272 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 CCDC144NLQ6NUI1 221 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 PODNL1Q6PEZ8 512 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 OPN5Q6U736 354 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 Q6ZPB1 254 aaPredicted RBP3.85□□□□□ -1.79
SNHG1-219ENST00000542112 GTF2H5Q6ZYL4 71 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 CTU1Q7Z7A3 348 aaKnown RBP3.85□□□□□ -1.79
SNHG1-219ENST00000542112 CMTM8Q8IZV2 173 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 LGI3Q8N145 548 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 SLC39A11Q8N1S5 342 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 Q8N3U1 123 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 TCTEX1D1Q8N7M0 179 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 TCEANCQ8N8B7 351 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 CYB561A3Q8NBI2 242 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 SUMF2Q8NBJ7 301 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 SIDT2Q8NBJ9 832 aaKnown RBP3.85□□□□□ -1.79
SNHG1-219ENST00000542112 ZNF485Q8NCK3 441 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 OR5AU1Q8NGC0 362 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 OR4N2Q8NGD1 307 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 OR52I1Q8NGK6 324 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 OR2I1PQ8NGU4 316 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 OR5K2Q8NHB8 316 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 PPP1R35Q8TAP8 253 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 ZNF519Q8TB69 540 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 DOK4Q8TEW6 326 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 ABHD5Q8WTS1 349 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 Q8WTZ3 238 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 FRZBQ92765 325 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 HOXB13Q92826 284 aaPredicted RBP3.85□□□□□ -1.79
SNHG1-219ENST00000542112 SLAMF6Q96DU3 332 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 TVP23CQ96ET8 276 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 HARBI1Q96MB7 349 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 ZNF75AQ96N20 296 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 IP6K3Q96PC2 410 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 AQP10Q96PS8 301 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 PANX1Q96RD7 426 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 PTPN18Q99952 460 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 MYOCQ99972 504 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 PYGO2Q9BRQ0 406 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 VAMP8Q9BV40 100 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 CIPCQ9C0C6 399 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 SLC5A7Q9GZV3 580 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 TCEAL2Q9H3H9 227 aaPredicted RBP3.85□□□□□ -1.79
SNHG1-219ENST00000542112 WDR54Q9H977 334 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 SYNPO2LQ9H987 977 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 AMBNQ9NP70 447 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 MMP25Q9NPA2 562 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 SLC2A4RGQ9NR83 387 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 MRPL17Q9NRX2 175 aaKnown RBP3.85□□□□□ -1.79
SNHG1-219ENST00000542112 ZNF586Q9NXT0 402 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 JPT1Q9UK76 154 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 MCTS1Q9ULC4 181 aaKnown RBP3.85□□□□□ -1.79
SNHG1-219ENST00000542112 RNF150Q9ULK6 438 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 RCE1Q9Y256 329 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 SIGLEC7Q9Y286 467 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 MRPS28Q9Y2Q9 187 aaKnown RBP3.85□□□□□ -1.79
SNHG1-219ENST00000542112 YIPF1Q9Y548 306 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 ETV7Q9Y603 341 aa3.85□□□□□ -1.79
SNHG1-219ENST00000542112 WDR90Q96KV7 1748 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 GBF1Q92538 1859 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 LCTP09848 1927 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 PPIAL4EA0A075B759 164 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 PPIAL4CA0A0B4J2A2 164 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 A0A1B0GW15 77 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 A0A1W2PRS3 328 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 IGSF23A1L1A6 192 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 GAGE12BA1L429 117 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 OR2W5A6NFC9 320 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 C9orf118A6NHY6 69 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 AQP7P3A6NL99 342 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 C17orf105B2RV13 164 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 FTCDNL1E5RQL4 147 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 PPIAL4DF5H284 164 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 G3V3Y1 287 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 HNRNPDLO14979 420 aaKnown RBP3.84□□□□□ -1.79
SNHG1-219ENST00000542112 MPPED1O15442 326 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 TRAF3IP2O43734 574 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-219ENST00000542112 FGF17O60258 216 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 RCBTB2O95199 551 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 OPN1SWP03999 348 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 HSPB1P04792 205 aaKnown RBP3.84□□□□□ -1.79
SNHG1-219ENST00000542112 TYMSP04818 313 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 REG1AP05451 166 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 CTSLP07711 333 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 CHRM2P08172 466 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 ANKRD34CP0C6C1 535 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 PGA3P0DJD8 388 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 PPIAL4FP0DN26 164 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 CD1DP15813 335 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 AKR1C4P17516 323 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 EN2P19622 333 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-219ENST00000542112 TUBG1P23258 451 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 GABRA3P34903 492 aa3.84□□□□□ -1.79
SNHG1-219ENST00000542112 OR1D2P34982 312 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms