RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 KRTAP21-3Q3LHN1 58 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 CDONQ4KMG0 1287 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 WDR38Q5JTN6 314 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 CEP78Q5JTW2 689 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 LAIR2Q6ISS4 152 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 FAHD2BQ6P2I3 314 aaPredicted RBP8.13□□□□□ -1.11
YBX3-212ENST00000542002 WDR82Q6UXN9 313 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 ZNF841Q6ZN19 808 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 Q6ZSR3 168 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 LHFPL3Q86UP9 236 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 KLHL36Q8N4N3 616 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 BOLLQ8N9W6 283 aaKnown RBP8.13□□□□□ -1.11
YBX3-212ENST00000542002 SEMA6DQ8NFY4 1073 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 OR8S1Q8NH09 359 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 NRG4Q8WWG1 115 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 RPL3LQ92901 407 aaKnown RBP8.13□□□□□ -1.11
YBX3-212ENST00000542002 RAB39BQ96DA2 213 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 FAHD2AQ96GK7 314 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 RNF170Q96K19 258 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 TMPRSS13Q9BYE2 586 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 SHARPINQ9H0F6 387 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 TLNRD1Q9H1K6 362 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 ISG20L2Q9H9L3 353 aaKnown RBP8.13□□□□□ -1.11
YBX3-212ENST00000542002 ACOXLQ9NUZ1 547 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 FRRS1LQ9P0K9 344 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 OPN4Q9UHM6 478 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 ZNF391Q9UJN7 358 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 GNG8Q9UK08 70 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 CDC42EP3Q9UKI2 254 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 GTF2A1LQ9UNN4 478 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 PIGLQ9Y2B2 252 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 MPC1Q9Y5U8 109 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 V9GYS6 101 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 DNHD1Q96M86 4753 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 IGHV3OR15-7A0A075B7D8 119 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 TRAV20A0A0B4J274 112 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 ZNF816-ZNF321PA0A0X1KG74 233 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 DAPL1A0PJW8 107 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 E9PI62 339 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 RHBDL1O75783 438 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 DHRS3O75911 302 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 TFF1P04155 84 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 GNAO1P09471 354 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 FAM157CP0CG43 387 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 AMY2BP19961 511 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 CCL1P22362 96 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 GNALP38405 381 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 MAP2K3P46734 347 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 GPM6AP51674 278 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 RIPPLY1Q0D2K3 151 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 CEACAM21Q3KPI0 293 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 BCL2L15Q5TBC7 163 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 ZNF691Q5VV52 312 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 TMEM42Q69YG0 159 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 GLCCI1Q86VQ1 547 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 FAM90A1Q86YD7 464 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 SPICQ8N5J4 248 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 ACBD7Q8N6N7 88 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 SCCPDHQ8NBX0 429 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 OR52I1Q8NGK6 324 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 OR11L1Q8NGX0 322 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 CNIH3Q8TBE1 160 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 CYGBQ8WWM9 190 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 RDH12Q96NR8 316 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 MDFIQ99750 246 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 WDR13Q9H1Z4 485 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 RASSF4Q9H2L5 321 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 OR51I2Q9H344 312 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 MRPS18AQ9NVS2 196 aaKnown RBP8.12□□□□□ -1.11
YBX3-212ENST00000542002 C14orf119Q9NWQ9 140 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 CTSZQ9UBR2 303 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 PCDHB10Q9UN67 800 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 POLR3KQ9Y2Y1 108 aaPredicted RBP8.12□□□□□ -1.11
YBX3-212ENST00000542002 NOP16Q9Y3C1 178 aaKnown RBP8.12□□□□□ -1.11
YBX3-212ENST00000542002 NAV3Q8IVL0 2385 aa8.12□□□□□ -1.11
YBX3-212ENST00000542002 TANC2Q9HCD6 1990 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 MXRA5Q9NR99 2828 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 LOC105371242A0A075B767 164 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.11□□□□□ -1.11
YBX3-212ENST00000542002 A0A1B0GW55 424 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 A6NLC8 198 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 ZNF732B4DXR9 585 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 J3QLW9 94 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 LGALS8O00214 317 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 MPZL2O60487 215 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 IGHA1P01876 353 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 GYPAP02724 150 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 DUX4L2P0CJ85 424 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 DUX4L3P0CJ86 424 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 DUX4L4P0CJ87 422 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 DUX4L5P0CJ88 424 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 DUX4L6P0CJ89 424 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 DUX4L7P0CJ90 424 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 IRF2P14316 349 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 ZNF19P17023 458 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 ADRA2CP18825 462 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 CFHR2P36980 270 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 SRSF2Q01130 221 aaKnown RBP8.11□□□□□ -1.11
YBX3-212ENST00000542002 IL5RAQ01344 420 aa8.11□□□□□ -1.11
YBX3-212ENST00000542002 TEX36Q5VZQ5 186 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms