RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 LGALS12Q96DT0 336 aa14.12□□□□□ -0.15
CD9-209ENST00000540891 TMPRSS13Q9BYE2 586 aa14.12□□□□□ -0.15
CD9-209ENST00000540891 MMP26Q9NRE1 261 aa14.12□□□□□ -0.15
CD9-209ENST00000540891 ACOXLQ9NUZ1 547 aa14.12□□□□□ -0.15
CD9-209ENST00000540891 POLR3KQ9Y2Y1 108 aaPredicted RBP14.12□□□□□ -0.15
CD9-209ENST00000540891 ARHGAP32A7KAX9 2087 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 ANXA2P2A6NMY6 339 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 TRAPPC2LH3BP13 241 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 LGALS8O00214 317 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 P2RY10O00398 339 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 TNFRSF13BO14836 293 aaPredicted RBP14.11□□□□□ -0.15
CD9-209ENST00000540891 PHF1O43189 567 aaPredicted RBP14.11□□□□□ -0.15
CD9-209ENST00000540891 MPZL2O60487 215 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 RPS2P15880 293 aaKnown RBP14.11□□□□□ -0.15
CD9-209ENST00000540891 FAHP16930 419 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 ACTC1P68032 377 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 ACTA1P68133 377 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 CDONQ4KMG0 1287 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 TP53I3Q53FA7 332 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 FAM76BQ5HYJ3 339 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 FAHD2BQ6P2I3 314 aaPredicted RBP14.11□□□□□ -0.15
CD9-209ENST00000540891 WDR82Q6UXN9 313 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 BOLLQ8N9W6 283 aaKnown RBP14.11□□□□□ -0.15
CD9-209ENST00000540891 OR14K1Q8NGZ2 314 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 FAHD2AQ96GK7 314 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 MICU1Q9BPX6 476 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 RTL8AQ9BWD3 113 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 RNPEPL1Q9HAU8 725 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 AMBNQ9NP70 447 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 ABCB9Q9NP78 766 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 MIOXQ9UGB7 285 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 V9GYS6 101 aa14.11□□□□□ -0.15
CD9-209ENST00000540891 PPIAL4CA0A0B4J2A2 164 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 A0A0G2JMP0 313 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 A0A0X1KG70 313 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 hCG_1807616A0A1W2PRN6 198 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 C3orf80F5H4A9 247 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.1□□□□□ -0.15
CD9-209ENST00000540891 CDIPTO14735 213 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 CASQ2O14958 399 aaPredicted RBP14.1□□□□□ -0.15
CD9-209ENST00000540891 WBP4O75554 376 aaKnown RBP14.1□□□□□ -0.15
CD9-209ENST00000540891 CLIC3O95833 236 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 CCL1P22362 96 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 CPT2P23786 658 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 PSMB10P40306 273 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 RIPPLY1Q0D2K3 151 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 DMRTC1Q5HYR2 192 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 WDR38Q5JTN6 314 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 CEP78Q5JTW2 689 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 ZBTB37Q5TC79 503 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 DCAF12L2Q5VW00 463 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 ZNF841Q6ZN19 808 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 DCDC5Q6ZRR9 648 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 PRSS35Q8N3Z0 413 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 PACRGLQ8N7B6 248 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 OR4M2Q8NGB6 313 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 LRRC29Q8WV35 223 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 RPL3LQ92901 407 aaKnown RBP14.1□□□□□ -0.15
CD9-209ENST00000540891 NEIL1Q96FI4 390 aaPredicted RBP14.1□□□□□ -0.15
CD9-209ENST00000540891 RNF170Q96K19 258 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 ZNF649Q9BS31 505 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 C8orf4Q9NR00 106 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 CTSZQ9UBR2 303 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 GNG8Q9UK08 70 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 PIGLQ9Y2B2 252 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 MYRFQ9Y2G1 1151 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 LRCH1Q9Y2L9 728 aa14.1□□□□□ -0.15
CD9-209ENST00000540891 DAPL1A0PJW8 107 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 OOEPA6NGQ2 149 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 TMEM210A6NLX4 147 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 SNTNA6NMZ2 147 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 MTRF1O75570 445 aaKnown RBP14.09□□□□□ -0.15
CD9-209ENST00000540891 CFHR2P36980 270 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 KIR3DL2P43630 455 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 OR12D2P58182 307 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 PAX2Q02962 417 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 ODF4Q2M2E3 257 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 ESCO2Q56NI9 601 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 OGFRL1Q5TC84 451 aaPredicted RBP14.09□□□□□ -0.15
CD9-209ENST00000540891 ZNF691Q5VV52 312 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 TEX36Q5VZQ5 186 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 TMEM42Q69YG0 159 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 THAP5Q7Z6K1 395 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 FAM90A1Q86YD7 464 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 ACBD7Q8N6N7 88 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 ZNF555Q8NEP9 628 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 Q96MT0 163 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 SSBP3Q9BWW4 388 aaPredicted RBP14.09□□□□□ -0.15
CD9-209ENST00000540891 MRPS18AQ9NVS2 196 aaKnown RBP14.09□□□□□ -0.15
CD9-209ENST00000540891 OPN4Q9UHM6 478 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 ENPP5Q9UJA9 477 aa14.09□□□□□ -0.15
CD9-209ENST00000540891 LOC105371242A0A075B767 164 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 IGHV3OR15-7A0A075B7D8 119 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 J3QLI3 93 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 FCN3O75636 299 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 IGHA1P01876 353 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 ZNF12P17014 697 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 GATA3P23771 443 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 SRP14P37108 136 aaKnown RBP14.08□□□□□ -0.16
CD9-209ENST00000540891 GPM6AP51674 278 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms