RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 SLC25A16P16260 332 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 TAS2R43P59537 309 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 SLC3A1Q07837 685 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 IRF3Q14653 427 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 CEACAM21Q3KPI0 293 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 CLVS2Q5SYC1 327 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 XAF1Q6GPH4 301 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 PRSS48Q7RTY5 328 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 MOGAT3Q86VF5 341 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 OR5P3Q8WZ94 311 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 ERGIC1Q969X5 290 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 FGGYQ96C11 551 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 C10orf35Q96D05 121 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 RNF170Q96K19 258 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 PDCD1LG2Q9BQ51 273 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 RTL8AQ9BWD3 113 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 PLEKHA1Q9HB21 404 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 ZNF275Q9NSD4 429 aaPredicted RBP13.11□□□□□ -0.31
DDB1-218ENST00000540784 CACNG2Q9Y698 323 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 SIRT4Q9Y6E7 314 aaPredicted RBP13.11□□□□□ -0.31
DDB1-218ENST00000540784 LMX1BO60663 402 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 MT-ND2P03891 347 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 NR4A2P43354 598 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 GATA4P43694 442 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 GPR6P46095 362 aaPredicted RBP13.1□□□□□ -0.31
DDB1-218ENST00000540784 RIN1Q13671 783 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 CDK5R1Q15078 307 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 SPHARQ15513 63 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 CEP78Q5JTW2 689 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 KCTD8Q6ZWB6 473 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 PEG10Q86TG7 708 aaKnown RBP13.1□□□□□ -0.31
DDB1-218ENST00000540784 OR5A2Q8NGI9 324 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 OR13C3Q8NGS6 347 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 OR11L1Q8NGX0 322 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 GHSRQ92847 366 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 ITPKCQ96DU7 683 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 REG4Q9BYZ8 158 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 FN3KRPQ9HA64 309 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 TMEM106BQ9NUM4 274 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 UFSP2Q9NUQ7 469 aa13.1□□□□□ -0.31
DDB1-218ENST00000540784 CREBBPQ92793 2442 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 LRRC30A6NM36 301 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 VWC2LB2RUY7 222 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 CLDN25C9JDP6 229 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 RNF223E7ERA6 249 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 MRPS14O60783 128 aaKnown RBP13.09□□□□□ -0.31
DDB1-218ENST00000540784 PTBP3O95758 552 aaKnown RBP13.09□□□□□ -0.31
DDB1-218ENST00000540784 IRF2P14316 349 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 ZNF20P17024 532 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 GABARAPL2P60520 117 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 MED22Q15528 200 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 MPPED2Q15777 294 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 PRAMEF6Q5VXH4 476 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 PLCXD3Q63HM9 321 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 TMEM42Q69YG0 159 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 DMKNQ6E0U4 476 aaPredicted RBP13.09□□□□□ -0.31
DDB1-218ENST00000540784 ZFP41Q8N8Y5 198 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 OR10AC1Q8NH08 325 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 ZNF420Q8TAQ5 688 aaPredicted RBP13.09□□□□□ -0.31
DDB1-218ENST00000540784 RPS4Y2Q8TD47 263 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 RAB1CQ92928 201 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 SMIM19Q96E16 107 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 TIMD4Q96H15 378 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 OR5M11Q96RB7 305 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 GPR173Q9NS66 373 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 ZNF281Q9Y2X9 895 aa13.09□□□□□ -0.31
DDB1-218ENST00000540784 ANKRD61A6NGH8 418 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 A6NLC8 198 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 TMEM210A6NLX4 147 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 ZNF732B4DXR9 585 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 H7C1Q1 480 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 PLPP2O43688 288 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 CELP19835 753 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 THBS2P35442 1172 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 PMELP40967 661 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 MAP2K4P45985 399 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 GNG3P63215 75 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 ACSM1Q08AH1 577 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 OR1M1Q8NGA1 313 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 OR51A4Q8NGJ6 313 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 GPR148Q8TDV2 347 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 PP6455Q8WZ26 134 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 HPS1Q92902 700 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 BPESC1Q9GZL8 116 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 C1orf123Q9NWV4 160 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 SLC7A11Q9UPY5 501 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 DHDHQ9UQ10 334 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 LSM2Q9Y333 95 aaKnown RBP13.08□□□□□ -0.32
DDB1-218ENST00000540784 MYO9AB2RTY4 2548 aa13.08□□□□□ -0.32
DDB1-218ENST00000540784 MAP1AP78559 2803 aaPredicted RBP13.08□□□□□ -0.32
DDB1-218ENST00000540784 AKAP9Q99996 3911 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 PNMA8CA0A1B0GUJ8 204 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 OR5B21A6NL26 309 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 TMEM178BH3BS89 294 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 GATBO75879 557 aaKnown RBP13.07□□□□□ -0.32
DDB1-218ENST00000540784 CD1AP06126 327 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 CD99P14209 185 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 USF1P22415 310 aaPredicted RBP13.07□□□□□ -0.32
DDB1-218ENST00000540784 GPM6AP51674 278 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 BDH1Q02338 343 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms