RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 DHRSXQ8N5I4 330 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 FAM216BQ8N7L0 139 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 BOLLQ8N9W6 283 aaKnown RBP5.96□□□□□ -1.46
YBX3-209ENST00000540747 SPERTQ8NA61 448 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 BEND2Q8NDZ0 799 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 OR56B2PQ8NGI1 322 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 OR2AE1Q8NHA4 323 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 C17orf50Q8WW18 174 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 SPRYD4Q8WW59 207 aaPredicted RBP5.96□□□□□ -1.46
YBX3-209ENST00000540747 CYGBQ8WWM9 190 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 LZICQ8WZA0 190 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 ST8SIA4Q92187 359 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 C12orf43Q96C57 262 aaKnown RBP5.96□□□□□ -1.46
YBX3-209ENST00000540747 ZNF799Q96GE5 643 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 HSH2DQ96JZ2 352 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 C7orf34Q96L11 122 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 NMNAT3Q96T66 252 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 DDOQ99489 341 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 PITX2Q99697 317 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 DCTN5Q9BTE1 182 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 YTHDF1Q9BYJ9 559 aaKnown RBP5.96□□□□□ -1.46
YBX3-209ENST00000540747 NDEL1Q9GZM8 345 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 RANBP3Q9H6Z4 567 aaPredicted RBP5.96□□□□□ -1.46
YBX3-209ENST00000540747 SIRT7Q9NRC8 400 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 NECAP2Q9NVZ3 263 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 AURKAIP1Q9NWT8 199 aaPredicted RBP5.96□□□□□ -1.46
YBX3-209ENST00000540747 PTTG2Q9NZH5 202 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 NDUFAF4Q9P032 175 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 MAGEL2Q9UJ55 1249 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 KCNG2Q9UJ96 466 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 FOXJ3Q9UPW0 622 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 CAB39Q9Y376 341 aaPredicted RBP5.96□□□□□ -1.46
YBX3-209ENST00000540747 FAM96BQ9Y3D0 163 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 MAB21L2Q9Y586 359 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 TRBV4-1A0A0J9YWV2 114 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 OR6C68A6NDL8 312 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 BTBD17A6NE02 478 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 UNC119BA6NIH7 251 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 H1F0P07305 194 aaKnown RBP5.95□□□□□ -1.46
YBX3-209ENST00000540747 SELLP14151 372 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 NCK1P16333 377 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 HIST1H1CP16403 213 aaKnown RBP5.95□□□□□ -1.46
YBX3-209ENST00000540747 MYF6P23409 242 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 NOS3P29474 1203 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 RPS6KA3P51812 740 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 UBE2E1P51965 193 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 TPTEP56180 551 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 CSNK2BP67870 215 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 ACSM1Q08AH1 577 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 APOFQ13790 326 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 GK3PQ14409 553 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 AANATQ16613 207 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 SLC36A3Q495N2 470 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 FAM98BQ52LJ0 330 aaKnown RBP5.95□□□□□ -1.46
YBX3-209ENST00000540747 OXLD1Q5BKU9 147 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 SMARCD3Q6STE5 483 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 DRAM2Q6UX65 266 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 WDR82Q6UXN9 313 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 Q8N2B8 174 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 KLHDC1Q8N7A1 406 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 PAPD5Q8NDF8 572 aaKnown RBP5.95□□□□□ -1.46
YBX3-209ENST00000540747 PIFOQ8TCI5 191 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 MRAPQ8TCY5 172 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 LRRC29Q8WV35 223 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 TFAP2CQ92754 450 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 SEH1LQ96EE3 360 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 CCL13Q99616 98 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 ANKRD60Q9BZ19 345 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 PPA2Q9H2U2 334 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 TOR3AQ9H497 397 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 SRA1Q9HD15 236 aaKnown RBP5.95□□□□□ -1.46
YBX3-209ENST00000540747 ONECUT1Q9UBC0 465 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 DNAH7Q8WXX0 4024 aa5.95□□□□□ -1.46
YBX3-209ENST00000540747 TCRBV5S2A0A599 114 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 A6NLC8 198 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 H3BUX3 64 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 M0R1W7 72 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 CXCR6O00574 342 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 BHLHE40O14503 412 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 GNGT2O14610 69 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 XPNPEP2O43895 674 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 CHST1O43916 411 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 ZNF682O95780 498 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 GRPP07492 148 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 HOXB6P17509 224 aaKnown RBP5.94□□□□□ -1.46
YBX3-209ENST00000540747 EEF1B2P24534 225 aaKnown RBP5.94□□□□□ -1.46
YBX3-209ENST00000540747 CAPGP40121 348 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 RPS27P42677 84 aaKnown RBP5.94□□□□□ -1.46
YBX3-209ENST00000540747 ALDH3B2P48448 385 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 MICBQ29980 383 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 KCTD21Q4G0X4 260 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 KLHL12Q53G59 568 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 ZNF788Q6ZQV5 615 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 PRSS45Q7RTY3 260 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 GPR141Q7Z602 305 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 CMTM4Q8IZR5 234 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 OR1M1Q8NGA1 313 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 OR4K13Q8NH42 304 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 FANK1Q8TC84 345 aa5.94□□□□□ -1.46
YBX3-209ENST00000540747 ZNRF4Q8WWF5 429 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms