RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 CD96P40200 585 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 SLC35A1P78382 337 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 CLPPQ16740 277 aaPredicted RBP8.91□□□□□ -0.98
TRAF1-202ENST00000540010 MRGPREQ86SM8 312 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 MISPQ8IVT2 679 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 MRPL41Q8IXM3 137 aaKnown RBP8.91□□□□□ -0.98
TRAF1-202ENST00000540010 EXD3Q8N9H8 876 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 AGBL5Q8NDL9 886 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 BPIFCQ8NFQ6 507 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 OR1S2Q8NGQ3 325 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 OR13C8Q8NGS7 320 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 CPT1CQ8TCG5 803 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 AKR1E2Q96JD6 320 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 LAT2Q9GZY6 243 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 PLEKHA3Q9HB20 300 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 CDH20Q9HBT6 801 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 A0A087WZY1 265 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 A0A1W2PPV4 95 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 CEBPZOSA8MTT3 80 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 PPP1R2P9O14990 202 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 GPR137BO60478 399 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 JTBO76095 146 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 LYPD3O95274 346 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 TIAF1O95411 115 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 ABHD16AO95870 558 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 IFNA10P01566 189 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 CAMK2BQ13554 666 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 PDCD1Q15116 288 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 C4orf17Q53FE4 359 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 PLA1AQ53H76 456 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 ANKRD16Q6P6B7 361 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF813Q6ZN06 617 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 TMEM123Q8N131 208 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 SCMH1Q96GD3 660 aa8.91□□□□□ -0.98
TRAF1-202ENST00000540010 ZC3HAV1LQ96H79 300 aaKnown RBP8.91□□□□□ -0.98
TRAF1-202ENST00000540010 SPTBN1Q01082 2364 aaKnown RBP8.91□□□□□ -0.98
TRAF1-202ENST00000540010 IGF2P01344 180 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 IGKV3-11P04433 115 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 HPNP05981 417 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 SULT1A3P0DMM9 295 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 SULT1A4P0DMN0 295 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 OR5H8P0DN80 308 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 LAP3P28838 519 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 NKX2-1P43699 371 aaPredicted RBP8.9□□□□□ -0.98
TRAF1-202ENST00000540010 ASCL1P50553 236 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 RNF4P78317 190 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 PLAURQ03405 335 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF266Q14584 549 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF626Q68DY1 528 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 RHOFQ9HBH0 211 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 OCIAD1Q9NX40 245 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF230Q9UIE0 474 aaPredicted RBP8.9□□□□□ -0.98
TRAF1-202ENST00000540010 TRAPPC2LQ9UL33 140 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 KPTNQ9Y664 436 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 POLEQ07864 2286 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 IGHV3-15A0A0B4J1V0 119 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 RAB19A4D1S5 217 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 GPR31O00270 319 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 H2AFB1P0C5Y9 115 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 CD37P11049 281 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 APLNRP35414 380 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 FOLR3P41439 243 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF117Q03924 483 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 SKP2Q13309 424 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 IL10RAQ13651 578 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 CDONQ4KMG0 1287 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 HIST2H3AQ71DI3 136 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 ADGRG3Q86Y34 549 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 SLC38A9Q8NBW4 561 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 ADIPOR1Q96A54 375 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 SLC39A9Q9NUM3 307 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 PRR13Q9NZ81 148 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 TP53TG5Q9Y2B4 290 aa8.9□□□□□ -0.98
TRAF1-202ENST00000540010 TRAV8-7A0A075B6U6 113 aa8.9□□□□□ -0.99
TRAF1-202ENST00000540010 ANKRD20A5PA0PJZ0 165 aa8.9□□□□□ -0.99
TRAF1-202ENST00000540010 IMPA2O14732 288 aa8.9□□□□□ -0.99
TRAF1-202ENST00000540010 OR2C1O95371 312 aa8.9□□□□□ -0.99
TRAF1-202ENST00000540010 CLDN1O95832 211 aa8.9□□□□□ -0.99
TRAF1-202ENST00000540010 CTLA4P16410 223 aa8.9□□□□□ -0.99
TRAF1-202ENST00000540010 FAHP16930 419 aa8.9□□□□□ -0.99
TRAF1-202ENST00000540010 PNLIPRP2P54317 469 aa8.9□□□□□ -0.99
TRAF1-202ENST00000540010 PRSS12P56730 875 aa8.9□□□□□ -0.99
TRAF1-202ENST00000540010 ADIRFQ15847 76 aa8.9□□□□□ -0.99
TRAF1-202ENST00000540010 ATPAF1Q5TC12 328 aaPredicted RBP8.9□□□□□ -0.99
TRAF1-202ENST00000540010 DOK3Q7L591 496 aa8.9□□□□□ -0.99
TRAF1-202ENST00000540010 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.9□□□□□ -0.99
TRAF1-202ENST00000540010 ANKRD37Q7Z713 158 aa8.9□□□□□ -0.99
TRAF1-202ENST00000540010 RFLNBQ8N5W9 214 aa8.9□□□□□ -0.99
TRAF1-202ENST00000540010 CALHM2Q9HA72 323 aa8.9□□□□□ -0.99
TRAF1-202ENST00000540010 MRPL22Q9NWU5 206 aaKnown RBP8.9□□□□□ -0.99
TRAF1-202ENST00000540010 GFOD1Q9NXC2 390 aa8.9□□□□□ -0.99
TRAF1-202ENST00000540010 MRM2Q9UI43 246 aaKnown RBP8.9□□□□□ -0.99
TRAF1-202ENST00000540010 RIF1Q5UIP0 2472 aaKnown RBP8.9□□□□□ -0.99
TRAF1-202ENST00000540010 TMEM272A0A1B0GTI8 110 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 OR6C6A6NF89 314 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 H3BP45 60 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 HSD17B6O14756 317 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 ADAP1O75689 374 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 TPPPO94811 219 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 CFDP00746 253 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms