RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 AKAIN1P0CW23 69 aa14.98□□□□□ -0.01
PCDHB17P-201ENST00000539533 MSR1P21757 451 aa14.98□□□□□ -0.01
PCDHB17P-201ENST00000539533 OR51D1Q8NGF3 324 aa14.98□□□□□ -0.01
PCDHB17P-201ENST00000539533 GPR148Q8TDV2 347 aa14.98□□□□□ -0.01
PCDHB17P-201ENST00000539533 ALKBH3Q96Q83 286 aaPredicted RBP14.98□□□□□ -0.01
PCDHB17P-201ENST00000539533 USB1Q9BQ65 265 aaKnown RBP14.98□□□□□ -0.01
PCDHB17P-201ENST00000539533 OR52A1Q9UKL2 312 aa14.98□□□□□ -0.01
PCDHB17P-201ENST00000539533 CEP295Q9C0D2 2601 aa14.98□□□□□ -0.01
PCDHB17P-201ENST00000539533 TRAV17A0A0B4J275 112 aa14.98□□□□□ -0.01
PCDHB17P-201ENST00000539533 SYNGR4O95473 234 aa14.98□□□□□ -0.01
PCDHB17P-201ENST00000539533 RPL35P42766 123 aaKnown RBP14.98□□□□□ -0.01
PCDHB17P-201ENST00000539533 AKR1D1P51857 326 aa14.98□□□□□ -0.01
PCDHB17P-201ENST00000539533 C11orf88Q6PI97 169 aa14.98□□□□□ -0.01
PCDHB17P-201ENST00000539533 FOXL2NBQ6ZUU3 175 aa14.98□□□□□ -0.01
PCDHB17P-201ENST00000539533 EIF4E3Q8N5X7 224 aaKnown RBP14.98□□□□□ -0.01
PCDHB17P-201ENST00000539533 PNRC2Q9NPJ4 139 aaKnown RBP14.98□□□□□ -0.01
PCDHB17P-201ENST00000539533 TRAV18A0A075B6X5 111 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 MEIS3P1A6NDR6 274 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 RPA2P15927 270 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 LSM6P62312 80 aaKnown RBP14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 SORDQ00796 357 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 DEFA5Q01523 94 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 ENDOGQ14249 297 aaKnown RBP14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 C4orf46Q504U0 113 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 BIVMQ86UB2 503 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 TUSC5Q8IXB3 177 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 OR6K3Q8NGY3 331 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 LRRC46Q96FV0 321 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 WDYHV1Q96HA8 205 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 UQCC2Q9BRT2 126 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 CHST6Q9GZX3 395 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 MFFQ9GZY8 342 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 MCTS1Q9ULC4 181 aaKnown RBP14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 IGKV3D-15A0A087WSY6 115 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 ABCD4O14678 606 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 SPDEFO95238 335 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 IGHV3-9P01782 118 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 CD3DP04234 171 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 POU3F4P49335 361 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 ZNF84P51523 738 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 GPR137CQ8N3F9 429 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 TSEN15Q8WW01 171 aaKnown RBP14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 PRRG4Q9BZD6 226 aa14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 NOSIPQ9Y314 301 aaKnown RBP14.97□□□□□ -0.01
PCDHB17P-201ENST00000539533 ZNF878C9JN71 531 aa14.96□□□□□ -0.01
PCDHB17P-201ENST00000539533 ZNHIT1O43257 154 aa14.96□□□□□ -0.01
PCDHB17P-201ENST00000539533 RLN2P04090 185 aa14.96□□□□□ -0.01
PCDHB17P-201ENST00000539533 MPGP29372 298 aa14.96□□□□□ -0.01
PCDHB17P-201ENST00000539533 MMP16P51512 607 aa14.96□□□□□ -0.01
PCDHB17P-201ENST00000539533 OR8S1Q8NH09 359 aa14.96□□□□□ -0.01
PCDHB17P-201ENST00000539533 KCNK15Q9H427 330 aa14.96□□□□□ -0.01
PCDHB17P-201ENST00000539533 CALHM2Q9HA72 323 aa14.96□□□□□ -0.01
PCDHB17P-201ENST00000539533 FAM206AQ9NX38 181 aa14.96□□□□□ -0.01
PCDHB17P-201ENST00000539533 CFPP27918 469 aa14.96□□□□□ -0.02
PCDHB17P-201ENST00000539533 PRSS3P35030 304 aa14.96□□□□□ -0.02
PCDHB17P-201ENST00000539533 PRKXP51817 358 aa14.96□□□□□ -0.02
PCDHB17P-201ENST00000539533 TAF13Q15543 124 aa14.96□□□□□ -0.02
PCDHB17P-201ENST00000539533 KLHL24Q6TFL4 600 aa14.96□□□□□ -0.02
PCDHB17P-201ENST00000539533 OR5T2Q8NGG2 359 aa14.96□□□□□ -0.02
PCDHB17P-201ENST00000539533 SNIP1Q8TAD8 396 aaKnown RBP14.96□□□□□ -0.02
PCDHB17P-201ENST00000539533 ASB13Q8WXK3 278 aa14.96□□□□□ -0.02
PCDHB17P-201ENST00000539533 DVL3Q92997 716 aaPredicted RBP14.96□□□□□ -0.02
PCDHB17P-201ENST00000539533 WASF3Q9UPY6 502 aa14.96□□□□□ -0.02
PCDHB17P-201ENST00000539533 APC2O95996 2303 aa14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 MRPL33O75394 65 aaKnown RBP14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 ITGA5P08648 1049 aa14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 STEAP1BQ6NZ63 245 aa14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 TMEM45BQ96B21 275 aa14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 FBXO17Q96EF6 278 aa14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 RFPL4AA6NLU0 287 aa14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 RFPL4AL1F8VTS6 287 aa14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 HSD11B1P28845 292 aa14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 ARHGDIBP52566 201 aa14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 MRPS34P82930 218 aaKnown RBP14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 CEACAM16Q2WEN9 425 aa14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 TSPO2Q5TGU0 170 aa14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 ASB5Q8WWX0 329 aa14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 FAM3DQ96BQ1 224 aa14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 ALX4Q9H161 411 aaPredicted RBP14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 POFUT1Q9H488 388 aa14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 SLC5A6Q9Y289 635 aa14.95□□□□□ -0.02
PCDHB17P-201ENST00000539533 MPTX1A8MV57 137 aa14.94□□□□□ -0.02
PCDHB17P-201ENST00000539533 P2RY10O00398 339 aa14.94□□□□□ -0.02
PCDHB17P-201ENST00000539533 SLC2A1P11166 492 aa14.94□□□□□ -0.02
PCDHB17P-201ENST00000539533 ANOS1P23352 680 aa14.94□□□□□ -0.02
PCDHB17P-201ENST00000539533 RAB11BQ15907 218 aa14.94□□□□□ -0.02
PCDHB17P-201ENST00000539533 C2orf76Q3KRA6 126 aa14.94□□□□□ -0.02
PCDHB17P-201ENST00000539533 FAM27BQ5VT28 67 aa14.94□□□□□ -0.02
PCDHB17P-201ENST00000539533 RHOUQ7L0Q8 258 aa14.94□□□□□ -0.02
PCDHB17P-201ENST00000539533 ZADH2Q8N4Q0 377 aa14.94□□□□□ -0.02
PCDHB17P-201ENST00000539533 RELL2Q8NC24 303 aaPredicted RBP14.94□□□□□ -0.02
PCDHB17P-201ENST00000539533 CPT1CQ8TCG5 803 aa14.94□□□□□ -0.02
PCDHB17P-201ENST00000539533 C12orf57Q99622 126 aa14.94□□□□□ -0.02
PCDHB17P-201ENST00000539533 PBOV1Q9GZY1 135 aa14.94□□□□□ -0.02
PCDHB17P-201ENST00000539533 GPR35Q9HC97 309 aa14.94□□□□□ -0.02
PCDHB17P-201ENST00000539533 TMEM38BQ9NVV0 291 aa14.94□□□□□ -0.02
PCDHB17P-201ENST00000539533 FREM1Q5H8C1 2179 aa14.94□□□□□ -0.02
PCDHB17P-201ENST00000539533 TRAV14DV4A0A0A6YYC5 116 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 LOC100289279A0A1B0GTE1 492 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 DLL1O00548 723 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms