RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 LRRIQ1Q96JM4 1722 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 LTBP2Q14767 1821 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 FABP12A6NFH5 140 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 A8MUA0 341 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 TNFSF11O14788 317 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 H6PDO95479 791 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 MYL2P10916 166 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF19P17023 458 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 DDTP30046 118 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 HMOX2P30519 316 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 HRH1P35367 487 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 COILP38432 576 aaPredicted RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 CCT6AP40227 531 aaKnown RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 MAGEA9P43362 315 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 CCL7P80098 99 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 IGLV3-21P80748 117 aaPredicted RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 DAZ2Q13117 558 aaKnown RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ASAH1Q13510 395 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 APOFQ13790 326 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 OR7A5Q15622 319 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 CLEC12BQ2HXU8 276 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 TMEM249Q2WGJ8 235 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 KRTAP27-1Q3LI81 207 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 KCTD16Q68DU8 428 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 MORN3Q6PF18 240 aaPredicted RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 CA13Q8N1Q1 262 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ZADH2Q8N4Q0 377 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF557Q8N988 423 aaPredicted RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 C19orf18Q8NEA5 215 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 OR10W1Q8NGF6 305 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 OR4D6Q8NGJ1 314 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ENKURQ8TC29 256 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 MAGEB18Q96M61 343 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF641Q96N77 438 aaPredicted RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 CYTH2Q99418 400 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ATP5SQ99766 215 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 RARRES2Q99969 163 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 SPZ1Q9BXG8 430 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 SHCBP1LQ9BZQ2 653 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ACTR6Q9GZN1 396 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ADAP2Q9NPF8 381 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 DAZ3Q9NR90 486 aaKnown RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 CCL28Q9NRJ3 127 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 RBAKQ9NYW8 714 aaPredicted RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ST3GAL6Q9Y274 331 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ENPP4Q9Y6X5 453 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 HYDINQ4G0P3 5121 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 DNMT1P26358 1616 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 ABCC2Q92887 1545 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 PLXNA4Q9HCM2 1894 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 NEO1Q92859 1461 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CEMIPQ8WUJ3 1361 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 IGLV2-33A0A075B6J2 118 aaPredicted RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 IGLV1-36A0A0B4J1U3 117 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 IGHV7-4-1A0A0J9YVY3 117 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 SMIM28A0A1B0GU29 152 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 SLC22A20A6NK97 555 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 TMEM210A6NLX4 147 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 ERI2A8K979 691 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 C12orf77C9JDV5 145 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 F8W036 122 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CD8AP01732 235 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 FGGP02679 453 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 OR5AL1P0C617 328 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 C8orf88P0DMB2 117 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 MYL9P24844 172 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 ACTR1BP42025 376 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 SERPINB8P50452 374 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 RND2P52198 227 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 OR10A3P58181 314 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 PRPS1P60891 318 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 YWHAEP62258 255 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 GNB2P62879 340 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 MS4A2Q01362 244 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 TCP10Q12799 353 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 MAPRE2Q15555 327 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 KRTAP13-3Q3SY46 172 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 TIMM50Q3ZCQ8 353 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 SAXO2Q658L1 398 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 TMEM215Q68D42 235 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 LAMTOR1Q6IAA8 161 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 PRMT9Q6P2P2 845 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 TRIM40Q6P9F5 258 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 ULK3Q6PHR2 472 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 RNF165Q6ZSG1 346 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 TRMT10CQ7L0Y3 403 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CMC1Q7Z7K0 106 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 PHF13Q86YI8 300 aaPredicted RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 LINC00612Q8N6U2 182 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 ASCC1Q8N9N2 400 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 OR52E4Q8NGH9 312 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 OR5AR1Q8NGP9 310 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 RHOXF1Q8NHV9 184 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 JOSD2Q8TAC2 188 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 RGP1Q92546 391 aaPredicted RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 DCUN1D4Q92564 292 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 SNF8Q96H20 258 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 WFIKKN1Q96NZ8 548 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CENPKQ9BS16 269 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF160Q9HCG1 818 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms