RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 AKIRIN2Q53H80 203 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 WDR38Q5JTN6 314 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 ZNF506Q5JVG8 444 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 LEG1Q6P5S2 330 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 CLEC18BQ6UXF7 455 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 TMEM184AQ6ZMB5 413 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 C11orf96Q7Z7L8 435 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 HMGN2P46Q86SG4 172 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 RTN4RL1Q86UN2 441 aaPredicted RBP5.93□□□□□ -1.46
USP28-207ENST00000538475 LRRTM4Q86VH4 590 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 CATSPERDQ86XM0 798 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 ZNF547Q8IVP9 402 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 CARFQ8N187 725 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 PRSS35Q8N3Z0 413 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 SLC22A24Q8N4F4 322 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 ZNF615Q8N8J6 731 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 AMER3Q8N944 861 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 LRTM2Q8N967 370 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 AVL9Q8NBF6 648 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 ADAD2Q8NCV1 583 aaKnown RBP5.93□□□□□ -1.46
USP28-207ENST00000538475 TMEM104Q8NE00 496 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 OR51A2Q8NGJ7 313 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 OR5AR1Q8NGP9 310 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 OR13C3Q8NGS6 347 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 OR2A1Q8NGT9 310 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 OR51F2Q8NH61 342 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 MFSD8Q8NHS3 518 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 FNDC9Q8TBE3 224 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 WFIKKN2Q8TEU8 576 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 COX14Q96I36 57 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 WFIKKN1Q96NZ8 548 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 IL17FQ96PD4 163 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 HIST1H2BLQ99880 126 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 SYT3Q9BQG1 590 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 NIPSNAP3BQ9BS92 247 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 AICDAQ9GZX7 198 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 WNT5BQ9H1J7 359 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 PCED1AQ9H1Q7 454 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 SRD5A3Q9H8P0 318 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 CDH20Q9HBT6 801 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 GCM1Q9NP62 436 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 FBXL17Q9UF56 701 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 ABT1Q9ULW3 272 aaKnown RBP5.93□□□□□ -1.46
USP28-207ENST00000538475 B3GALT5Q9Y2C3 310 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 SLCO1B1Q9Y6L6 691 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 DOCK9Q9BZ29 2069 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 ADAMTS9Q9P2N4 1935 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 FAM230AA0A1W2PPH8 454 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 A0A1W2PS29 197 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 FEZF1A0PJY2 475 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 BLACEA4D250 179 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 MEIS3P1A6NDR6 274 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 TMEM235A6NFC5 223 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 PRR32B1ATL7 298 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 PEX12O00623 359 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 TP53I11O14683 189 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 ITGB1BP1O14713 200 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 SMAD7O15105 426 aaKnown RBP5.92□□□□□ -1.46
USP28-207ENST00000538475 RRP8O43159 456 aaKnown RBP5.92□□□□□ -1.46
USP28-207ENST00000538475 SOD3P08294 240 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 SRP19P09132 144 aaKnown RBP5.92□□□□□ -1.46
USP28-207ENST00000538475 TRGC1P0CF51 173 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 SMIM10L1P0DMW3 83 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 GZMBP10144 247 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 MMP9P14780 707 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 FABP4P15090 132 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 CST5P28325 142 aaPredicted RBP5.92□□□□□ -1.46
USP28-207ENST00000538475 GDI1P31150 447 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 OR1D2P34982 312 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 HRH1P35367 487 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 RBMXP38159 391 aaKnown RBP5.92□□□□□ -1.46
USP28-207ENST00000538475 BCL6P41182 706 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 CDKN2AP42771 156 aaKnown RBP5.92□□□□□ -1.46
USP28-207ENST00000538475 CSNK1A1P48729 337 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 DNASE1L1P49184 302 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 SLC11A1P49279 550 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 NPY4RP50391 375 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 HLA-DRB3P79483 266 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 QRFPP83859 136 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 ZNHIT3Q15649 155 aaPredicted RBP5.92□□□□□ -1.46
USP28-207ENST00000538475 TAF9Q16594 264 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 ITPRIPL2Q3MIP1 535 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 C1orf194Q5T5A4 169 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 RIPPLY2Q5TAB7 128 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 SP5Q6BEB4 398 aaPredicted RBP5.92□□□□□ -1.46
USP28-207ENST00000538475 TANGO2Q6ICL3 276 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 POMZP3Q6PJE2 187 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 LANCL3Q6ZV70 420 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 ZNF573Q86YE8 665 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 SGPP2Q8IWX5 399 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 CSNK1A1LQ8N752 337 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 OR5H2Q8NGV7 314 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 OR10J5Q8NHC4 309 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 MARCH1Q8TCQ1 289 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 Q8WTZ3 238 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 BRI3BPQ8WY22 251 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 TMEM230Q96A57 120 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 TMEM18Q96B42 140 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 FGGYQ96C11 551 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 GNPNAT1Q96EK6 184 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms