RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 MCFD2Q8NI22 146 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 Q96MF0 132 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 DNTTIP1Q9H147 329 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 ENPP5Q9UJA9 477 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 RAB26Q9ULW5 256 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 IGHV1-18A0A0C4DH31 117 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 NOS1APO75052 506 aaPredicted RBP6.25□□□□□ -1.41
MSH6-209ENST00000538136 PTP4A3O75365 173 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 GATBO75879 557 aaKnown RBP6.25□□□□□ -1.41
MSH6-209ENST00000538136 ARL6IP5O75915 188 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 ONECUT2O95948 504 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 SOD3P08294 240 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 APELAP0DMC3 54 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 ZNF182P17025 639 aaPredicted RBP6.25□□□□□ -1.41
MSH6-209ENST00000538136 BLVRBP30043 206 aaPredicted RBP6.25□□□□□ -1.41
MSH6-209ENST00000538136 IL2RGP31785 369 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 OR10A3P58181 314 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 EMX1Q04741 257 aaPredicted RBP6.25□□□□□ -1.41
MSH6-209ENST00000538136 ZNF691Q5VV52 312 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 GLIPR1L1Q6UWM5 242 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 FAM131AQ6UXB0 335 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 IGFBPL1Q8WX77 278 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 DYRK2Q92630 601 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 RAB1CQ92928 201 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 KCNJ15Q99712 375 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 IFT46Q9NQC8 304 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 NPAP1Q9NZP6 1156 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 CLN8Q9UBY8 286 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 RFPL4AA6NLU0 287 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 RFPL4AL1F8VTS6 287 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 H7C417 338 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 LILRA1O75019 489 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 HEXAP06865 529 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 HOXB6P17509 224 aaKnown RBP6.24□□□□□ -1.41
MSH6-209ENST00000538136 REG1BP48304 166 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 GRB2P62993 217 aaKnown RBP6.24□□□□□ -1.41
MSH6-209ENST00000538136 PSG7Q13046 419 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 TIMM50Q3ZCQ8 353 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 TMED4Q7Z7H5 227 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 TGIF2LYQ8IUE0 185 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 TRUB1Q8WWH5 349 aaKnown RBP6.24□□□□□ -1.41
MSH6-209ENST00000538136 FAM168AQ92567 244 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 PELI1Q96FA3 418 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 DOK1Q99704 481 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 ZC4H2Q9NQZ6 224 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 SLC17A5Q9NRA2 495 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 ZNF355PQ9NSJ1 428 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 AMDHD2Q9Y303 409 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 IRGMA1A4Y4 181 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 MBD3L4A6NDZ8 208 aaPredicted RBP6.24□□□□□ -1.41
MSH6-209ENST00000538136 MBD3L3A6NE82 208 aaPredicted RBP6.24□□□□□ -1.41
MSH6-209ENST00000538136 MBD3L5A6NJ08 208 aaPredicted RBP6.24□□□□□ -1.41
MSH6-209ENST00000538136 H7C2Y5 167 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 CCRL2O00421 344 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 ALOX5APP20292 161 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 CD24P25063 80 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 RBP2P50120 134 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 TDGF1P3P51864 188 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 GNG2P59768 71 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 ISL1P61371 349 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 LY6EQ16553 131 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 GABRG1Q8N1C3 465 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 ZNRF1Q8ND25 227 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 MBD3L2Q8NHZ7 208 aaPredicted RBP6.24□□□□□ -1.41
MSH6-209ENST00000538136 LEAP2Q969E1 77 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 MYCBPQ99417 103 aaPredicted RBP6.24□□□□□ -1.41
MSH6-209ENST00000538136 DCSTAMPQ9H295 470 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 IGHV3-72A0A0B4J1Y9 119 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 TMEM229AB2RXF0 380 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 DAOP14920 347 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 HLA-DMAP28067 261 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 ARPC4P59998 168 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 RAB40BQ12829 278 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 FAM27BQ5VT28 67 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 CDH24Q86UP0 819 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 BCL2L2Q92843 193 aaPredicted RBP6.24□□□□□ -1.41
MSH6-209ENST00000538136 BOD1Q96IK1 185 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 OPALINQ96PE5 141 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 RTL8AQ9BWD3 113 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 PIGMQ9H3S5 423 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 SMURF1Q9HCE7 757 aa6.24□□□□□ -1.41
MSH6-209ENST00000538136 MRM2Q9UI43 246 aaKnown RBP6.24□□□□□ -1.41
MSH6-209ENST00000538136 DEGS1O15121 323 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 ACSM4P0C7M7 580 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 ARSBP15848 533 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 PSMB1P20618 241 aaKnown RBP6.23□□□□□ -1.41
MSH6-209ENST00000538136 TTKP33981 857 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 GSK3AP49840 483 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 ERVFRD-1P60508 538 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 ESCO2Q56NI9 601 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 SPANXN2Q5MJ10 180 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 Q5PR19 223 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 C8orf82Q6P1X6 216 aaPredicted RBP6.23□□□□□ -1.41
MSH6-209ENST00000538136 OR8B4Q96RC9 309 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 BPESC1Q9GZL8 116 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 MRPS28Q9Y2Q9 187 aaKnown RBP6.23□□□□□ -1.41
MSH6-209ENST00000538136 UGT2A1Q9Y4X1 527 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 NPIPB7O75200 414 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 CBR1P16152 277 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 CALCRP30988 508 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms