RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 OR10Z1Q8NGY1 313 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 FAM81AQ8TBF8 368 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 THEM6Q8WUY1 208 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 DNAJC9Q8WXX5 260 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 LRTOMTQ8WZ04 291 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 DYRK2Q92630 601 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 ITPKCQ96DU7 683 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 HIST1H2AAQ96QV6 131 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 CHIAQ9BZP6 476 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 RASSF4Q9H2L5 321 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 TNFRSF19Q9NS68 423 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 PDP1Q9P0J1 537 aaPredicted RBP10.85□□□□□ -0.67
RTN3-207ENST00000536011 ONECUT1Q9UBC0 465 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 FAM96BQ9Y3D0 163 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 RHBDD3Q9Y3P4 386 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 BTBD17A6NE02 478 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 CDIPTO14735 213 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 CST4P01036 141 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 ANXA8P13928 327 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 OMGP23515 440 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 RPS7P62081 194 aaKnown RBP10.84□□□□□ -0.67
RTN3-207ENST00000536011 GUCA2AQ02747 115 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 PRDX4Q13162 271 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 KCTD18Q6PI47 426 aaPredicted RBP10.84□□□□□ -0.67
RTN3-207ENST00000536011 TREML4Q6UXN2 200 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 LDLRAD3Q86YD5 345 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 C11orf53Q8IXP5 236 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 ZDHHC23Q8IYP9 409 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 NPRL2Q8WTW4 380 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 MED30Q96HR3 178 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 AMELYQ99218 206 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 CCL13Q99616 98 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 PKP2Q99959 881 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 THTPAQ9BU02 230 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 DPAGT1Q9H3H5 408 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 HAO2Q9NYQ3 351 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 LAMP5Q9UJQ1 280 aa10.84□□□□□ -0.67
RTN3-207ENST00000536011 ACOD1A6NK06 481 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 ZNF850A8MQ14 1090 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 ACOT8O14734 319 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 SELENOFO60613 162 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 FBP1P09467 338 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 EEF1B2P24534 225 aaKnown RBP10.83□□□□□ -0.68
RTN3-207ENST00000536011 POU4F2Q12837 409 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 IKZF1Q13422 519 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 DNAL1Q4LDG9 190 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 ATPAF1Q5TC12 328 aaPredicted RBP10.83□□□□□ -0.68
RTN3-207ENST00000536011 LCN1P1Q5VSP4 162 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 OLFML2AQ68BL7 652 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 STUMQ69YW2 141 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 DEGS2Q6QHC5 323 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 METAP1DQ6UB28 335 aaPredicted RBP10.83□□□□□ -0.68
RTN3-207ENST00000536011 VMO1Q7Z5L0 202 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 KRT77Q7Z794 578 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 CPOQ8IVL8 374 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 FAM216BQ8N7L0 139 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 LY6G5BQ8NDX9 201 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 CANT1Q8WVQ1 401 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 WFDC12Q8WWY7 111 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 OR5P3Q8WZ94 311 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 PRRG3Q9BZD7 231 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 TAS2R1Q9NYW7 299 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 TMEM14AQ9Y6G1 99 aa10.83□□□□□ -0.68
RTN3-207ENST00000536011 A0A0U1RQK1 487 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 A0A0U1RQV5 110 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 ZNF816-ZNF321PA0A0X1KG74 233 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 CLPSL1A2RUU4 121 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.82□□□□□ -0.68
RTN3-207ENST00000536011 T-ENOLP0DO92 83 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 ATP6V1B1P15313 513 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 MAP2K3P46734 347 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 FLOT2Q14254 428 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 BRICD5Q6PL45 260 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 GDPGP1Q6ZNW5 385 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 SPATA24Q86W54 205 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 COMMD2Q86X83 199 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 OR8B12Q8NGG6 310 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 H1FXQ92522 213 aaKnown RBP10.82□□□□□ -0.68
RTN3-207ENST00000536011 PIGCQ92535 297 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 RNF170Q96K19 258 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 CLPTM1LQ96KA5 538 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 RAB3IPQ96QF0 476 aaPredicted RBP10.82□□□□□ -0.68
RTN3-207ENST00000536011 MROQ9BYG7 248 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 YIPF3Q9GZM5 350 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 SLC25A19Q9HC21 320 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 C1RLQ9NZP8 487 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 ZNF319Q9P2F9 582 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 DNAJB9Q9UBS3 223 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 LRP12Q9Y561 859 aa10.82□□□□□ -0.68
RTN3-207ENST00000536011 M0QZ24 198 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 GYG2O15488 501 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 WIPF1O43516 503 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 GPR137BO60478 399 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 PAHP00439 452 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 IGHV4-59P01825 116 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 ALOX5APP20292 161 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 ACKR3P25106 362 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 IER3P46695 156 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 TGM4P49221 684 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 GNG3P63215 75 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms