RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ENTPD1P49961 510 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 CRYBA2P53672 197 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 TAS2R41P59536 307 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 DEFB136Q30KP8 78 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 ZNF260Q3ZCT1 412 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 PAGE3Q5JUK9 113 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 ZNF626Q68DY1 528 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 SLC18B1Q6NT16 456 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 FAM122BQ7Z309 247 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 EGFL6Q8IUX8 553 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 ZNF695Q8IW36 515 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 IFT20Q8IY31 132 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 C11orf65Q8NCR3 313 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 OR4M1Q8NGD0 313 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 OR5M8Q8NGP6 311 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 OR13C2Q8NGS9 318 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 TSSK2Q96PF2 358 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 ATF6BQ99941 703 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 TLNRD1Q9H1K6 362 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 ZFP57Q9NU63 452 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 OR2AT4A6NND4 320 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 M0R135 149 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 OR5F1O95221 314 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 CD14P08571 375 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 VIMP08670 466 aaKnown RBP6.52□□□□□ -1.37
CLIP1-206ENST00000535290 PGA5P0DJD9 388 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 PPIBP23284 216 aaKnown RBP6.52□□□□□ -1.37
CLIP1-206ENST00000535290 OR3A4PP47883 348 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 SLC9A3P48764 834 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 CENPAP49450 140 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 TPTEP56180 551 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 OR12D2P58182 307 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 RPL31P62899 125 aaKnown RBP6.52□□□□□ -1.37
CLIP1-206ENST00000535290 SPIBQ01892 262 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 ZNF273Q14593 569 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 WHAMMP3Q1A5X7 153 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 RFX4Q33E94 735 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 C9orf152Q5JTZ5 239 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 ZNF770Q6IQ21 691 aaPredicted RBP6.52□□□□□ -1.37
CLIP1-206ENST00000535290 PTCHD4Q6ZW05 846 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 OAFQ86UD1 273 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 DPP10Q8N608 796 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 OR11H6Q8NGC7 330 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 RPL3LQ92901 407 aaKnown RBP6.52□□□□□ -1.37
CLIP1-206ENST00000535290 ZNF799Q96GE5 643 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 NOL4LQ96MY1 436 aaPredicted RBP6.52□□□□□ -1.37
CLIP1-206ENST00000535290 ZNF570Q96NI8 536 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 SP140LQ9H930 580 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 NMNAT1Q9HAN9 279 aaPredicted RBP6.52□□□□□ -1.37
CLIP1-206ENST00000535290 USE1Q9NZ43 259 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 NLKQ9UBE8 527 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 ZNF222Q9UK12 451 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 SH3GLB1Q9Y371 365 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 LRP12Q9Y561 859 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 LYVE1Q9Y5Y7 322 aa6.52□□□□□ -1.37
CLIP1-206ENST00000535290 hCG_1809904A0A1W2PP81 198 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 A0A1W2PPE2 198 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 A0A1W2PR64 198 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 A0A1W2PRV1 198 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 ANKRD30BLA7E2S9 258 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 EFCAB9A8MZ26 197 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 PRR23D1E9PI22 279 aaPredicted RBP6.51□□□□□ -1.37
CLIP1-206ENST00000535290 PRR23D2P0DMB1 279 aaPredicted RBP6.51□□□□□ -1.37
CLIP1-206ENST00000535290 PSG2P11465 335 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 CAPZA1P52907 286 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 DLX6P56179 175 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 DYNC1I2Q13409 638 aaKnown RBP6.51□□□□□ -1.37
CLIP1-206ENST00000535290 KRR1Q13601 381 aaKnown RBP6.51□□□□□ -1.37
CLIP1-206ENST00000535290 SEC23BQ15437 767 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 PLBD1Q6P4A8 553 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 C16orf89Q6UX73 402 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 C16orf82Q7Z2V1 217 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 NRMQ8IXM6 262 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 KIRREL3Q8IZU9 778 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 OR10Z1Q8NGY1 313 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 LINC00476Q8WZB0 136 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 AKR1E2Q96JD6 320 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 CDRT15Q96T59 188 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 SLC25A33Q9BSK2 321 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 YY1AP1Q9H869 796 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 N6AMT1Q9Y5N5 214 aa6.51□□□□□ -1.37
CLIP1-206ENST00000535290 A0A1W2PPH5 198 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 MEX3AA1L020 520 aaKnown RBP6.5□□□□□ -1.37
CLIP1-206ENST00000535290 TRIM64CA6NLI5 447 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 TRPC5OSA6NMA1 111 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 C17orf98A8MV24 154 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 EVPLLA8MZ36 301 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 H3BUI4 141 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 CDC42EP2O14613 210 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 LDLRAD4O15165 306 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 UBDO15205 165 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 BIRC5O15392 142 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 TIPRLO75663 272 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 KITP10721 976 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 SLC2A1P11166 492 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 CDKN2AP42771 156 aaKnown RBP6.5□□□□□ -1.37
CLIP1-206ENST00000535290 OR1E2P47887 323 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 STX3Q13277 289 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 CYP51A1Q16850 503 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 ANKDD1AQ495B1 522 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms