RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 Q6ZN92 141 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 NDUFAF7Q7L592 441 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 GLT6D1Q7Z4J2 308 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 ZNF429Q86V71 674 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 CRLF3Q8IUI8 442 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 ZNF567Q8N184 647 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 KIF2BQ8N4N8 673 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 MDS2Q8NDY4 140 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 CA5BP1Q8WTZ4 195 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 HAUS1Q96CS2 278 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 RNF185Q96GF1 192 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 TIMD4Q96H15 378 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 OLFM3Q96PB7 478 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 KLK12Q9UKR0 248 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 RRP15Q9Y3B9 282 aaKnown RBP4.01□□□□□ -1.77
CASP4-213ENST00000534356 ARHGAP21Q5T5U3 1957 aa4□□□□□ -1.77
CASP4-213ENST00000534356 A0A1W2PPV9 198 aa4□□□□□ -1.77
CASP4-213ENST00000534356 LOC110117498-PIK3R3F6TDL0 507 aa4□□□□□ -1.77
CASP4-213ENST00000534356 MAGEB3O15480 346 aa4□□□□□ -1.77
CASP4-213ENST00000534356 CTAG2O75638 210 aa4□□□□□ -1.77
CASP4-213ENST00000534356 HSMCR30P0CW71 290 aa4□□□□□ -1.77
CASP4-213ENST00000534356 GZMAP12544 262 aa4□□□□□ -1.77
CASP4-213ENST00000534356 RPL13AP40429 203 aaKnown RBP4□□□□□ -1.77
CASP4-213ENST00000534356 GPM6AP51674 278 aa4□□□□□ -1.77
CASP4-213ENST00000534356 ASPHQ12797 758 aa4□□□□□ -1.77
CASP4-213ENST00000534356 DUSP7Q16829 419 aa4□□□□□ -1.77
CASP4-213ENST00000534356 DMRTC1Q5HYR2 192 aa4□□□□□ -1.77
CASP4-213ENST00000534356 C16orf47Q6ZP98 133 aaPredicted RBP4□□□□□ -1.77
CASP4-213ENST00000534356 TAS2R42Q7RTR8 314 aa4□□□□□ -1.77
CASP4-213ENST00000534356 PID1Q7Z2X4 250 aa4□□□□□ -1.77
CASP4-213ENST00000534356 PAQR7Q86WK9 346 aa4□□□□□ -1.77
CASP4-213ENST00000534356 KRT222Q8N1A0 295 aa4□□□□□ -1.77
CASP4-213ENST00000534356 OR52H1Q8NGJ2 320 aa4□□□□□ -1.77
CASP4-213ENST00000534356 LILRB4Q8NHJ6 448 aa4□□□□□ -1.77
CASP4-213ENST00000534356 UBE2E3Q969T4 207 aa4□□□□□ -1.77
CASP4-213ENST00000534356 DNAJC1Q96KC8 554 aaKnown RBP4□□□□□ -1.77
CASP4-213ENST00000534356 FCRL1Q96LA6 429 aa4□□□□□ -1.77
CASP4-213ENST00000534356 OXGR1Q96P68 337 aa4□□□□□ -1.77
CASP4-213ENST00000534356 FOXC2Q99958 501 aa4□□□□□ -1.77
CASP4-213ENST00000534356 SELENOSQ9BQE4 189 aa4□□□□□ -1.77
CASP4-213ENST00000534356 ACTR6Q9GZN1 396 aa4□□□□□ -1.77
CASP4-213ENST00000534356 DEFB127Q9H1M4 99 aa4□□□□□ -1.77
CASP4-213ENST00000534356 GOLPH3Q9H4A6 298 aa4□□□□□ -1.77
CASP4-213ENST00000534356 WDR54Q9H977 334 aa4□□□□□ -1.77
CASP4-213ENST00000534356 EML4Q9HC35 981 aaKnown RBP4□□□□□ -1.77
CASP4-213ENST00000534356 PTBP2Q9UKA9 531 aaKnown RBP4□□□□□ -1.77
CASP4-213ENST00000534356 TFR2Q9UP52 801 aa4□□□□□ -1.77
CASP4-213ENST00000534356 USF3Q68DE3 2245 aa4□□□□□ -1.77
CASP4-213ENST00000534356 ALPK2Q86TB3 2170 aa4□□□□□ -1.77
CASP4-213ENST00000534356 MXRA5Q9NR99 2828 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 HIVEP2P31629 2446 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 IGLV3-12A0A075B6K2 115 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 IGKV1-8A0A0C4DH67 115 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 A0A0G2JMM0 328 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 A0A1W2PPB8 328 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 A0A1W2PRS3 328 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 TCRBV9S1A1TA0A576 114 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 SLC5A10A0PJK1 596 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 KIR3DP1A8MWS1 328 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 H0YGG7 62 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 CDC40O60508 579 aaKnown RBP eCLIP3.99□□□□□ -1.77
CASP4-213ENST00000534356 PROSCO94903 275 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 ZNF44P15621 663 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 ABOP16442 354 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 CRISP2P16562 243 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 FMO3P31513 532 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 CCR7P32248 378 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 BTCP35070 178 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 GSSP48637 474 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 MARCKSL1P49006 195 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 ZNF140P52738 457 aaPredicted RBP3.99□□□□□ -1.77
CASP4-213ENST00000534356 UBE2HP62256 183 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 OXA1LQ15070 435 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 PDK2Q15119 407 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 CFAP157Q5JU67 520 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 ATAD3BQ5T9A4 648 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 TMEM205Q6UW68 189 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 ZNF620Q6ZNG0 422 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 RGS9BPQ6ZS82 235 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 NLRP9Q7RTR0 991 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 TMEM61Q8N0U2 210 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 DTX3LQ8TDB6 740 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 ELMO1Q92556 727 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.99□□□□□ -1.77
CASP4-213ENST00000534356 DCUN1D1Q96GG9 259 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 ITCHQ96J02 903 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 COPS8Q99627 209 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 ROGDIQ9GZN7 287 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 MRPL47Q9HD33 250 aaKnown RBP3.99□□□□□ -1.77
CASP4-213ENST00000534356 ZNF282Q9UDV7 671 aaPredicted RBP3.99□□□□□ -1.77
CASP4-213ENST00000534356 HEBP2Q9Y5Z4 205 aa3.99□□□□□ -1.77
CASP4-213ENST00000534356 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.99□□□□□ -1.77
CASP4-213ENST00000534356 CHD3Q12873 2000 aaKnown RBP3.99□□□□□ -1.77
CASP4-213ENST00000534356 ABCA1O95477 2261 aa3.98□□□□□ -1.77
CASP4-213ENST00000534356 IGLV3-16A0A075B6K0 115 aa3.98□□□□□ -1.77
CASP4-213ENST00000534356 A0A0G2JN53 185 aa3.98□□□□□ -1.77
CASP4-213ENST00000534356 RBMY1BA6NDE4 496 aaKnown RBP3.98□□□□□ -1.77
CASP4-213ENST00000534356 RBMY1EA6NEQ0 496 aaKnown RBP3.98□□□□□ -1.77
CASP4-213ENST00000534356 GABRR3A8MPY1 467 aa3.98□□□□□ -1.77
CASP4-213ENST00000534356 GMFGO60234 142 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms